FMO03072.5prime Sequence
1273 bp (940 high quality bases) assembled on 2008-07-09
> FMO03072.5prime
TATAGCATACATAAAACGAAGTTATCAGTCGACATGCTTAAGCTGGGACT
CGCGGTCCCCACTCGATGGTCCTTCAGATGTCGTCGCCTTGGTGGAATGG
CTATCATTAAAGGCGAGACAAAAATCTCCGTGGACAAGCAGAAAGCAGTC
CAGCCGGAACAGGATGAGGACCAACAAGAGGTCGAGCCGGATTCCCAGCC
GGCGGAAGAAAATCCAAGTATTCACAGGAACCAGAGAGTATTAGTTAATC
ATGCCATTCAGGAGATTCAGCACAGGCCGTTGGAGGTGCCCACAATTATC
GGCGATGATACAGTGTACACCATGGACACTCAGCGTGTTTGCTGCCCGCA
TCACCTGCAGACGAACTTGGCTCACGTCTACTACGCCAATCGCAAGCAAA
TCGAGGCGGCAATTAAGTCTGCTCTTTCGGCGCAAGGAACTTGGAGTCTA
GTTCCCATCGCCCAGCGACTGGCCATTTGGCGACGTGCCGCCACCATTAT
CGAGGAGGACGAGCTGCGGCTGAGAGTGTTCCTCATGATGACGCTGAGCA
AAACCGCCGACGATGCGACGCGGGACATTCGGCGGCTACTCACATCGCTG
AGGGCCAATGCTGACTATTTGGAGCATCTGTCCGAGCTGCGCTTTGAGAT
CCAGGGTGATATGAATGTATTCCCCAGCTTTCATTTGCGACCCATGGATG
GATTTGTGGCCGCACTGGCACCATTTGAATCGGTGGCCTTGTCATCCAGC
TTGGCCCTCTGTCCGGCGCTCATGGGCAACACGGTGTTGTGGAATCCCTC
ATTGGAAGTGGCACCAGTGAGCTATTTAATTTCAGAGCCTTCCAGGAGGC
GGGTTTGCCCAGCGGCGTTATCAACTTAGTGCCGGCCAACGAGCGTCTGT
TCTTGGACACATTCACGGATGCCGTGCACTTTGCCGGACTGAATACTCAG
CCGAGTGCAGCTTTTTACAGGCCATGGTGCACAGCTGGTTGAGCGAATCG
AATGGAGCGATACATCTTGTTTTTCCTCGTCTGGGTGGCCGAGTGGCCCG
GGTCAAGAAACTTTTCATTTTGTCCATGCACGGGCTAAGGTGGAATTCTG
TCTGTCTCAACCACGGTGCAGGCGGGTCCTTTTGGTCTTTGTGCCGGTAC
AGTATTTACTATTCGCTCTCTCCCGGAAATGTATAGTGCCCTAGTCATGT
GTGCACGCCCTCATGGGAGGAGATGTGTGGTGTGAGGCACCACGCGGACA
CAATCGTTGAACCCACACTGCCG
FMO03072.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:09:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6661-RA | 1976 | CG6661-RA | 150..1313 | 34..1222 | 4970 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:09:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14034925..14036005 | 34..1125 | 4640 | 96.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:09:47 has no hits.
FMO03072.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:04:58 Download gff for
FMO03072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6661-RA | 146..1242 | 27..1141 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:03 Download gff for
FMO03072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6661-RA | 146..1242 | 27..1141 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:38 Download gff for
FMO03072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6661-RA | 146..1242 | 27..1141 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:49:38 Download gff for
FMO03072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14034921..14036017 | 27..1141 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:03 Download gff for
FMO03072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14028021..14029117 | 27..1141 | 97 | | Plus |
