FMO03073.5prime Sequence
1259 bp (885 high quality bases) assembled on 2008-07-09
> FMO03073.5prime
GTATAGCATACATAATACGAAGTTATCAGTCGACATGATGATTTGTCTTC
TGTGGATTTCGGTGGCCATACTTGTGGTCATCCACTGGATCTATAAGGTA
AACAAAGACTACAATATCCTGGCCTTTTTCGCCCGAAGGGTTCAAACCAA
GGATGGCAAACCATTGGACAGCTTAGTGCCCATGATCAAGGGCCGAACTG
TGTTCGCCAACTGCTTCGATCTCTTAGGAAAAGACACTGACCAGGTATTT
ACTCACTTACGCCAGTTGGCGAAGAACAGCGGAGACAGTTATCTGCAGTA
CTCCATGGGGTTTTCCAACTTCAATGTTATAGATGCGCATAATGCAGCGA
ACATATTGAATCATCCTAATCTGATAACGAAGGGTGTAATATATAATTTT
CTTCACCCTTTCCTAAGAACTGGCGTTCTAACAGCGACAGAAAAGAAATG
GCACACGCGACGCAGTATGCTCACTAGGACATTCCATTTGGATATATTGA
ACCAGTTCCAAGAAATCTTTATAGCGGAGAGCTTGAAGTTCGTAAGTCAG
TTCCAAGGACAAAATGAAGTTGTGGTTTCTTTGAAGGACCGCATATCCCG
ATTTACCCTAAATAGCATTTGTGAAACTGCCATGGGAATCAAACTGGATG
AAATGGCAGAGAAGGGCGATCGCTACAGGGCGAACTTTCACATAATCGAC
GAAGGACTTACCAGGCGCATAGTAAACCCGCTCTATTGGGACGATTGTGT
ATACAACATGTTCACGGGACACAAGTACAACGCAGCTCTAAAAGTGGTAC
ACGAATTTTCCAGAGAGATAATCGCAAAACGCAGAGTACTACTTGAAGAG
GAGCTGGAAAATACAAGAGCCACTCAAACGGCTGACGATGATATATGCGT
GATTAGAAAGAACGCTTCGCCATGCTGGACACCTTGATTTGCGCGAAAAG
GATGGACTAATCGACGATATTGGGATTCCTGAGGAGGCGGACCCGCTGAT
GGCTGAAAGTTACGAATACCACATCCATTGGCTCTGGTCTTTGGCCCTAA
TGAAATATGTTCTCTCTTAATGCCGCTGAACATGGAAACTGGTGCTACCA
AAGAGAATCAGGATCAAATTCTGGAACGAACTGGAGCACACCCCTATCTT
AAGCTCACCCTAAGTAAACCTTAGGTGATCTAGGCTACACTTACAGGACC
ATGTGCGCCGTGTATCCCTTCAATTCCCAGTTCTAGGGGCTGCTCAAAAC
AATCTCCTC
FMO03073.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4p2-RA | 1777 | CG1944-RA | 39..1122 | 33..1125 | 5010 | 97.9 | Plus |
Cyp4p3-RA | 1667 | CG10843-RA | 315..687 | 315..687 | 345 | 74.3 | Plus |
Cyp4p1-RA | 1680 | CG10842-RA | 358..688 | 357..687 | 305 | 73.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9238489..9238760 | 623..894 | 1345 | 99.6 | Plus |
2R | 25286936 | 2R | 9237550..9237756 | 33..239 | 1035 | 100 | Plus |
2R | 25286936 | 2R | 9237836..9238037 | 239..440 | 1010 | 100 | Plus |
2R | 25286936 | 2R | 9238819..9238970 | 895..1046 | 510 | 94.8 | Plus |
2R | 25286936 | 2R | 9238331..9238431 | 523..623 | 505 | 100 | Plus |
2R | 25286936 | 2R | 9238089..9238173 | 438..522 | 425 | 100 | Plus |
2R | 25286936 | 2R | 9240609..9240684 | 446..521 | 185 | 82.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:14:10 has no hits.
FMO03073.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:05:04 Download gff for
FMO03073.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4p2-RA | 12..1111 | 21..1133 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:15 Download gff for
FMO03073.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4p2-RA | 30..1129 | 21..1133 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:45:46 Download gff for
FMO03073.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4p2-RA | 30..1129 | 21..1133 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:45:46 Download gff for
FMO03073.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9238490..9238760 | 624..894 | 99 | -> | Plus |
2R | 9237837..9238037 | 240..440 | 100 | -> | Plus |
2R | 9238092..9238173 | 441..522 | 100 | -> | Plus |
2R | 9238331..9238431 | 523..623 | 100 | -> | Plus |
2R | 9237541..9237756 | 21..239 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:15 Download gff for
FMO03073.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5125046..5125261 | 21..239 | 97 | -> | Plus |
arm_2R | 5125342..5125542 | 240..440 | 100 | -> | Plus |
arm_2R | 5125597..5125678 | 441..522 | 100 | -> | Plus |
arm_2R | 5125836..5125936 | 523..623 | 100 | -> | Plus |
arm_2R | 5125995..5126265 | 624..894 | 99 | -> | Plus |