FMO03085.5prime Sequence
1236 bp (1022 high quality bases) assembled on 2008-07-09
> FMO03085.5prime
TTCGTATAGCATAATAAAACGAAGTTATCAGTCGACATGTATAGCCTCAA
GGAGGGGCTCCGGGCTCTTAACAGTCGAACGAGACCAGCTCTCATTTGCC
GGCGCAACATTTCGGAGGAGGCTCCCAAACAGGATAGTCCGTTTAAATGG
AGAAAACCAATTGGCCAGCACACAGGAATCAATATATACAATCACGGCTT
GCGGCAGAAGGTACCCCTAATCCTACGCAATCCCCAAATGGTCACATGGT
ACACTTGCGGACCCACTGTTTATGACTCCGCGCACCTAGGTCATGCCAGC
ACCTATGTCAAGGTAGACATCCTGCAGCGCATTCTCCGCGATTATTTTAA
AATCAACCTGGTGACAGCCATGAACATCACGGATGTTGACGACAAGATCA
TTAAGCGGGCCCAGCTCGCTGGACTGGACTGGCAGAAGATGGCGCGAGCT
TATGAAGCGGAATTTCGTCAGGACATGTTGCGTCTCAATGTTCAGGCGCC
GGATGTGCGCAGTCATGTGACTACCACCATGCCTGTCATTATTCAGTTCA
TTCAGCAGCTGATAGACGGAAAGCAGGCTTACGTTACCCCGGATAACTCT
GTTTACTTTGATGTCTCCAAAAGCAAGAACTATGGAAAGCTTCAAAACTT
AGGCCTAAGCGAGGACAAATTGGACCCCATCAAACGAAACACTGCCGATT
TTGCCTTGTGGAAGGCGCGTAAAAGTGGCAGTGAGCCCACGTGGGCTGCA
CCCTGGGGTGGCGAGGGACGCCCCGGTTGGCACATTGAATGCAGCGCCAT
TGCAGGTTATTCTTTGGCCGCCAGTTGGACATTCATGCTGGCGGCTTGGA
CTTGCGTTTTCCGCACCACGAAAACGAGGAGGCGCCAGTGCTGTGCACGG
TATAAAACTGACCAGTGGGTAACTATTGGGTGCCCACCGGACAACTTCAT
ATGGTTGGAAATCGGCAAGAAGATGTCCAAGTCTTCTGGGCAACACGATC
TCCGTGTCGGAGCTGCTGAAGAAGTACACCGCCGATGAGTTTCGATTGGC
CTGCCTGCTGTCAAATACCGCAATGCCATGCCCTAATAGCGATCAGTTGA
ATGGTGACGCTCGCAGACCTTGCCAGCGTTTAAAACTTTCAGTCGATTTT
ACTGCCCTATTACCCAATCCGGAGTCTAGTACTGGTAAACAGAGGACTTA
AGGCCCCACGTGACTTCTATTCAGTATACACCGCAA
FMO03085.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8257-RB | 2108 | CG8257-RB | 102..1208 | 37..1142 | 5105 | 98 | Plus |
| CG8257-RA | 1813 | CG8257-RA | 102..1208 | 37..1142 | 5105 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14160040..14161091 | 1100..48 | 4810 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:10:15 has no hits.
FMO03085.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:00:41 Download gff for
FMO03085.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-RA | 67..1179 | 37..1147 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:05:07 Download gff for
FMO03085.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-RA | 102..1214 | 37..1147 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:18 Download gff for
FMO03085.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-RA | 102..1214 | 37..1147 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:18 Download gff for
FMO03085.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14159990..14161091 | 48..1147 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:05:07 Download gff for
FMO03085.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10047495..10048596 | 48..1147 | 97 | | Minus |
