FMO03093.5prime Sequence
1255 bp (962 high quality bases) assembled on 2008-07-09
> FMO03093.5prime
CTTCGTATAGCATAATAAAAAGAAGTTATCAGTCGACATGAACGGACTGA
TTGTGTTTAACAGCGCCAACGATGTTGTATACCAGAAGCTTAACGAGCCG
CTGGCGCAGAAGATCCGGAGTGTGGCCACCACCCAGGGCCTGCTCCAGTC
CGGCGGCTCCCTGGACAGCAACATACTGCTGCAGATTTTCAGCCCCATCG
TTGGATCTCAGCGAATAATGCAGTGCCAGTTCGATAATGCCTACTCCAGC
CTGCAGTGTGAGCAAGGCTTCAATTTGGTGTTCGGCGAACTTCTTGGCTT
CACCTTTCTGAAGATCGGACAAATACCCGTGGAGCTGCTGGGTCGCCAAA
TGGGTGTGGCCATTACGCTGACGCGCTATTGTTACGGCGCCAATTTGTTT
GCCGCCCAGGCGGGGGCCATGCAACAGGAGTTGCTGACGCAGTGCCTCGA
CTGCTATGAGACTTTGTTGTGGGAGGAGGATCAGACGTACCTGCTGGAGG
CCATGCCCAGGCTGCTGATCAACACGGAACTAAAGAGGACAGTGCATCTG
ACGCTGGACGCCACGCTTGAGCACTTGCGCCAGCTCGGACTGCCCCGAGC
CCACGCCCTGTTGCTCGTTTCCAACAAGCTGGTGGCCGCGAACAGCACTC
GGCAAGCTCTGCCGCTTGCTGCCGCCGACCTACTCTTCCTCAGCCTCATG
TCACGCGCCCTGCAAGCGCCAAAGTCCCCTTCCCAGCGAGCAGTAGCTGT
ATTCCTGCAGGGTGTCTCCTATGATGTGAACTCTGGCTGCGTTCCCAGTA
TCGTGCACATCTCGCGTCTCCATGGTAACCAAGTTCTCCTGCAGGTCATC
GAGTACGCCCACATGCCACTGACCAGCTGCATCTACGATTCCTTCTTTGT
GCTTGAAAAATCGTGGCTGTCAGCATCAGGCGATTCGGATGCCCTGAAGC
CCGCCTTCGAGAACTGGATCGTTTATTGTGCAGCCTTGACCGCTTTGGAG
CGATATCTGAAACAGCGATCGGAAACCGATGACCTAGAGACTGCACGAAG
AGTTCGCCCCCTAAATGGGAAAATCTCGCAGATGTACCACTGGAGTACCT
CAAGAACTCTGACCGAGCTGGCTCGTGAGGATTGACCCAATTGCCTCTGT
TCGGAAGAACTGAACCGAATTCCACTCCTGCTGGCACAGGTTCAGGTTCA
TGAACTGGAATACACCTCTCTGGATAATCAGCGGAAAGCGCAAAGATGGG
TGGAG
FMO03093.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| HPS1-RA | 2074 | CG12855-RA | 84..1189 | 38..1135 | 5040 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14855512..14856557 | 38..1076 | 4750 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:17:04 has no hits.
FMO03093.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:02:21 Download gff for
FMO03093.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HPS-RA | 66..1190 | 31..1148 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:39 Download gff for
FMO03093.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HPS1-RA | 79..1203 | 31..1148 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:19 Download gff for
FMO03093.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HPS1-RA | 79..1203 | 31..1148 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:19 Download gff for
FMO03093.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14855500..14856631 | 25..1148 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:39 Download gff for
FMO03093.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10743005..10744136 | 25..1148 | 96 | | Plus |
