FMO03094.5prime Sequence
1276 bp (951 high quality bases) assembled on 2008-07-09
> FMO03094.5prime
GTATAGCATACATAATACGAAGTTATCAGTCGACATGCTGGATAAGCCAG
CCCCAGTGGGGGCCTCATGGTACACCAATCTGTCCGACTTCCAGGTGCAG
GCCGTCGAGGCACTGGCCTTCTCGATTCGGGATGACAATGCGGAGGGTAC
TGTGTACCGCACCCAGTTCTGTCTCAGTCGCTTGGGAGTCACGCCCATGG
TAAAGACCCGGATGTTGCGGAAGCTAATTGGGATTTGTCGCGGCAGCGAC
TTGGCATTCCTTTACTTTCTGATGGAGGCCTGCTATAAGGGCACAGGATC
TGCGTACAGTGAACGGATCCTGATGTCCGCCATCACCTTTTTGGATCTGG
AGATGACCATGAGGGAACTGGACAAAATACTGCCGCCGGGAGTGGAACGG
CTGAATAAGAAAGAGTCGATAGCTCCGCCAGTGGATTATCGCTCCATGTC
GTTGCCAACACCTTTACCGACCAAACGGGAATCGGATCTCCGAAAGGTCC
GCTCGCCCTACTTTACCCCGTTGCCCAAACCAAAGCTACCCAAGGGTGGC
GAGAAGTTCACTGCCAAGAGACCCTGCCTCGTGGTCTCCTTTCCATTCTG
GCCCGCTGGCGAGAGGCCCAACTACAAGGTGAACGAGGAGAACCGCTGGT
TCGCCGCTTACAGGTTCCAGCCGGTGAAGCGGATGCTCTTCAAGATGGTC
GGCGACATCATGACCGACTACTGGACAAAGATAGATGGTACTCAACCGGC
GGAGAACGAAGCGATGCCCATGTGCGAGTTCCACAAGGAGGCACTGCGGC
AGGAGCAGCTGGTGAAGGATGCAGCTGTGGTCAAGGCCCACAAACAGTGC
TTGGCTCTCGTGGATTTCACTCACGGCAGGATGCCCTCCTTAAGAGACCG
TATCGTGGCCCAGTTGGAAAGGGACCATGAGGAGGTCACCGCTGCGTTGG
AAACGACTTCGTGAGCGCCTCCATACGGATGTCATGTTGTTGGAAGAATC
AACGATCAGAATGGTGTCCGGTGGGGCAAAGTGCTACGGCTGTGCAGGAT
AATCAGGAAAAAGTACCCTATCCCAGAAGCGGAAACTCGGGCGTCTGAGG
TCCAAACTACAATTGGGATACCAAGGTGAAACACGGCAAGGGGTAACGGT
GAATTCGGTAAGGTAAAGTGCGGGGTTTTCGGAAATCGAGTGAATGACAT
CAAGGCCACAGGTAACCGGTGGAAGACAAAAAGACTGTGACCAAAATGGT
CTCCACCCCCCTCAATATATAGGTGG
FMO03094.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ssp5-RA | 2384 | CG14735-RA | 123..1252 | 34..1174 | 4905 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12033264..12034330 | 34..1107 | 4605 | 96.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:13:03 has no hits.
FMO03094.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:06:50 Download gff for
FMO03094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ssp5-RA | 116..1261 | 28..1187 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:58 Download gff for
FMO03094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ssp5-RA | 116..1261 | 28..1187 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:19 Download gff for
FMO03094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ssp5-RA | 116..1261 | 28..1187 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:19 Download gff for
FMO03094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12033257..12034340 | 28..1117 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:58 Download gff for
FMO03094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7858979..7860062 | 28..1117 | 97 | == | Plus |
