FMO03095.5prime Sequence
1262 bp (926 high quality bases) assembled on 2008-07-09
> FMO03095.5prime
TCGTATAGCATACATAATACGAAGTTATCAGTCGACATGGAGAGGCGAAG
ACCCCGAAAGTCCTCGCGTAAATACGTGTGCTCCAAATCAAACTCTTCAG
TTGGAGGAGGAGTAGAGGAAGACAGTGGCTCATCATTGCCTGCCACCGCC
AAAGCGTTACTCCTCCAGCCGGACGGTAATAAAGCACCAACCATGACATC
CCTTCTGGGCGAACGACTCAGAAGAGTTTCTCGCATCGCAAGAGCTCCGC
ACAGCCTACAAGTTACCGAAAATCCAGAAGAAGGTGGAGCACCAATCGTA
CCACTAAGAGAATCCGGCGCATCGGAAGTGTCAGAAGTAAATCCGGGGGT
TATGGTCATTCCGGAGTCGGCCAGTCCCCGGGGATCGGCGGTGCATGGAC
AACACGCTAGCTTGGTCTTCAGTGCTGAAGCCAGGGATTCGGACAGTACG
CGGATATCGGAGGAAATGGTGGAAGTGTTCCAAACCTCTTCGGCGAGAAC
CACATCCAATGAGCCCGCAGGGGGCAATCTGCGCTTTGAAACCACTCCCG
TGGCTGTAAGCGAAAGTATGGTTGGCAATATAAACTTCTCCCCGAACGCC
ATCTACGATCAGAACAGGTATAGCAGCATGATGTCCAACGGGGATTACAA
TAATGGCAACAGGGGTGAGAGTGAGAGGAGCGTGGGAGCCTGCCACCATG
GTTGGGCGGCGCGACAACAACAAGTTGCCGCTGGACCTGCCGGCAGAGAC
ACCCTGGGATTCGCCATCAGTCTGGGCGCCGCTAATTTGGGCCAGAACCC
GATGCAGTCTGGGCGTTGCATGCGATGAGGACTGTGGCTATGGAACTGGC
TGTGATTTTGGATGCGGTCAGGCCCATGGCGTTGATCCCGGAAGCTTTTC
TAGGTCCGGTAATCATTGTTATCTGGTTCCTTTAATATTGACAATCTGGA
TCAAGGAGCCCACCTGTACAGAGCGCCTACGAGGAGCTCAGGTGGCGGCT
TAGCAAGTTGGCGCCGGGCAGCGGGGAACTTTGACAGATTTCGGAAGTGA
CCAGCTTAACTTCTTCATACCTTCCTATTGGACGTCCTCGGGGTTTAGTT
TTTTTTGCCATCTGCCGAATACATTTTGGATACTCTTGGCTTACATGTCT
GTCGAATGTCTGTGTGACACTGAAAACGCCGAATCGCCACATTCAGGTGC
GGTGTAATTTGTGGTACCAGGGCACTATGGCGTGCTCGCTTGCCGTTGTT
GCCATCATCTGC
FMO03095.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:47:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4955-RA | 1838 | CG4955-RA | 138..1310 | 37..1204 | 5000 | 96.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17081584..17082646 | 37..1096 | 4570 | 97.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:47:34 has no hits.
FMO03095.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:02:16 Download gff for
FMO03095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4955-RA | 73..1189 | 27..1141 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:36 Download gff for
FMO03095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4955-RA | 73..1189 | 27..1141 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:26:09 Download gff for
FMO03095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4955-RA | 132..1248 | 27..1141 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:26:09 Download gff for
FMO03095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17081578..17082650 | 27..1098 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:36 Download gff for
FMO03095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16975611..16976683 | 27..1098 | 97 | -> | Plus |
