FMO03105.5prime Sequence
1226 bp (998 high quality bases) assembled on 2008-07-07
> FMO03105.5prime
TATAGCATACATTATACGAAGTTATCAGTCGACATGTCCCAGTACACGCC
CAACCAGCGGCTGGACACGCCCGGCGCCCAGGAGTTCGGATTCCCGTACT
CACCGTACGAAATCCAGGAGCAGCTGATGCAGGAGCTCTTCCAAGTGCTC
GAGAGAGGTCAGGTGGGCATATTCGAGAGTCCAACGGGAACGGGGAAGTC
CCTCACCCTCACCTGCGGCGCCCTCACCTGGCTGGCTAGGCACGAGGAGC
TGGTGCGCACGGAAATGCTGGCCAGGATTCGCGGAGTAGAACAGGAGTTG
GCTAAACTCAAGGAGGAGAGCGAGCAGTCCAGTAACTGGCTGGAGAGCCA
GGGAAAGTCCAGAGCACAGCGGGCGGAGCTCCTTAGATTGCAGCACCTGC
AGGCTTTGCTGGACAAACAAGAGCAGCAGCTGGATCAGATCAGGAAAGGG
GCTAAAAAGCATAAGCGGCAAGGAAGGGTGCACCCAGGCAAGCTTGAGGA
ACTGGAGAAGGACCTGGATCCTGAATCCGACTCGGATTCAGAACACGAAA
CCGCCGATGGACCGCAGGAAGCAGCCGAAGACCGCTATCGCCCTGTGCAA
ATCTTCTTTTGCAGCCGCACCCATTCGCAGTTGGCACAAATTGTGGCCGA
ACTGCGGAAAACACCTCATGGCCAGTCGGTAAGGTCCATTTCCCTGGGCT
CGCGGCAGCAGCTGTGCGGGAATCCCGCAGTCCGGAAGCTGAAGCATGTC
GGCCTGATGAACGAGCGGTGCCTGGATATGGCTACAAAGAAAGCACGCCC
CAATCCCAGCAAAAAAAGTCGGCTAACTGCAGAGGCCCACAGGTAGATGC
CCGTTTAAAGCGGCTTCCCTGGTGGAATCCCTCAGGATTTGGCTTTGACC
GAACCGCTGGAACATCGAGGAGCTGGCCAATGAGGGGACCGCCTGCGTGC
CTGCTCGTATTACCGCCTTCAGATTCCGCTGTGGAGCAACGCTCAACTTA
ATACTACTGCCCGTATCACCTGCTTGCTCCAGAAGTCCGTCTGTAACCAG
CTGGTATAAGTTCTTAAGGGTTCAATCGTCTTAGTAGATGAGCTTCACAA
CTACTGAACAGCTGTCCACTGCCACGCTCCGAACTCGCGCTCAGCAGTGA
ACGGGCCAAGGTGCATTTCCGCTTAAAGGACACCTTCCAAGCGTTTCCAC
CCGAGAAACTCCTCCTGTGGAATATC
FMO03105.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:13:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11403-RA | 2890 | CG11403-RA | 103..1272 | 34..1197 | 4935 | 95.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:13:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1238721..1239782 | 1101..34 | 4580 | 97.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:13:07 has no hits.
FMO03105.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 14:59:51 Download gff for
FMO03105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11403-RA | 69..1214 | 24..1169 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:33 Download gff for
FMO03105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11403-RA | 94..1239 | 24..1169 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:45:12 Download gff for
FMO03105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11403-RA | 94..1239 | 24..1169 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:45:12 Download gff for
FMO03105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1238646..1239791 | 24..1169 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:33 Download gff for
FMO03105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1132679..1133824 | 24..1169 | 96 | | Minus |
