FMO03112.5prime Sequence
580 bp (577 high quality bases) assembled on 2008-07-07
> FMO03112.5prime
GGTCTCATTCGGGGACCTGGCCAAGCCATGTTATATCATTACCTTCAAGG
GCCTGCGGATTATGCTGGACTGCGGTCTCACGGAGCAGACAGTCCTGAAT
TTCCTTCCGCTGCCCTTCGTTCAGTCACTGAAGTGGTCCAATCTGCCCAA
CTTCGTGCCCAGTCGGGATCATGATCCCCAAATGGATGGCGAGTTGAAGG
ACTGCTGTGGCCGGGTTTTCGTGGACTCGACGCCCGAGTTTAATCTTCCC
ATGGACAAAATGCTGGATTTCAGCGAAGTGGATGTGATACTTATCTCGAA
TTATCTTAATATGCTGGCCTTGCCGTATATCACGGAAAACACGGGGTTCA
AGGGCAAAGTCTATGCCACGGAGCCAACGCTGCAGATCGGCCGATTTTTC
CTGGAGGAGCTGGTGGACTATATCGAAGTGTCGCCCAAGGCGTGCACCGC
GCGCTTGTGGAAGGAGAAGCTTCATCTGCTGCCCAGTCCCTTGAGCGAAG
CCTTTCGCGCCAAGAAGTGGCGCACTATCTTTAGTCTTAAGGATGTCCAA
GGCAGTCTGTCCAAGGTGACCATCATGGGG
FMO03112.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IntS9-RA | 2078 | CG5222-RA | 85..654 | 10..579 | 2835 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16104913..16105482 | 579..10 | 2835 | 99.8 | Minus |
Blast to na_te.dros performed 2014-11-28 22:59:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TART-A | 13424 | TART-A 13424bp | 10700..10873 | 226..58 | 128 | 57.6 | Minus |
FMO03112.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 14:59:48 Download gff for
FMO03112.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5222-RA | 61..638 | 1..580 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:40 Download gff for
FMO03112.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IntS9-RA | 77..654 | 1..580 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:46:18 Download gff for
FMO03112.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IntS9-RA | 77..654 | 1..580 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:46:18 Download gff for
FMO03112.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16104912..16105489 | 1..580 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:40 Download gff for
FMO03112.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16098012..16098589 | 1..580 | 99 | | Minus |
