FMO03114.5prime Sequence
865 bp (865 high quality bases) assembled on 2008-07-07
> FMO03114.5prime
TAGCATCCTTTATACGAAGTTATCAGTCGACATGGCGCCAAAAAAGTCCA
CCATTGTGCTCAATGTGGAGCAGTTTATTCACGACATCGAGGAGCGCCCG
GCCATCTGGAACCGCAATTTCCACTGCAACAAGGCCTTCCTCGAGCAGAT
GTGGGACGAGCTGAGCGGAGCGCACAAACTGCCAAGCGAGGTTTACGTTT
TGGACGATGGCGCCGAGGTGGATCTGGATCTGGGAAACTATGAACGGTTT
TTGGATGTTACCCTGCATCGGGACAACAACATAACCACCGGAAAAATTTA
CAAGTTGGTCATTGAGAAGGAGCGCACTGGCGAGTACTTGGGCAAAACGG
TTCAAGTTGTCCCACACATCACTGATGCCATTCAGGAATGGGTGGAGCGC
GTGGCCCAGACACCCGTTCAGGGATCTTCAAAGCCACAGGTGTGCATCGT
GGAATTGGGAGGAACGATTGGTGACATCGAAGGCATGCCTTTCGTAGAGG
CCTTCCGTCAGTTTCAGTTCCGCGTAAAGAGAGAGAACTTCTGTTTGGCC
CATGTGTCGCTGGTTCCGTTGCCAAAAGGCTACCGGAGAACCCAAGACCA
AGCCCACACAAAGTTCGGTCAGAGAACTGAGAGGATGTGGCCTGAGTCCC
GATTTGATTGTCTGCCGATCGGAGAAACCCATTGGACTGGAGGTCAGGAG
AGATCAGCAACTTTTGTCATGTGGGGCCCGGATCAGGTGATATGCATCCA
CGATTTGAACTCCATTTATCATGTTCCGCTGCTGATGGAGCAGAATGGTG
TTATTGAATACCTAAATGAGCGCCTACAGCTTAATATCGACATGAGCAAG
AAGACCATATGCTTG
FMO03114.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CTPsyn-RB | 2423 | CG45070-RB | 246..1079 | 32..865 | 4050 | 99.3 | Plus |
| CTPsyn-RC | 2627 | CG45070-RC | 604..1283 | 186..865 | 3280 | 99.1 | Plus |
| CTPsyn-RA | 2406 | CG45070-RA | 383..1062 | 186..865 | 3280 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15111085..15111587 | 355..857 | 2310 | 99 | Plus |
| 3L | 28110227 | 3L | 15110816..15110986 | 186..356 | 855 | 100 | Plus |
| 3L | 28110227 | 3L | 15108805..15108959 | 32..186 | 775 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:39:37 has no hits.
FMO03114.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:03:59 Download gff for
FMO03114.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6854-RB | 244..1077 | 32..865 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:40 Download gff for
FMO03114.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CTPsyn-RB | 377..1210 | 32..865 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:37 Download gff for
FMO03114.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CTPsyn-RB | 246..1079 | 32..865 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:37 Download gff for
FMO03114.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15108805..15108958 | 32..185 | 100 | -> | Plus |
| 3L | 15110816..15110986 | 186..356 | 100 | -> | Plus |
| 3L | 15111087..15111587 | 357..857 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:40 Download gff for
FMO03114.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15101905..15102058 | 32..185 | 100 | -> | Plus |
| arm_3L | 15103916..15104086 | 186..356 | 100 | -> | Plus |
| arm_3L | 15104187..15104687 | 357..857 | 99 | | Plus |
