FMO03116.5prime Sequence
904 bp (904 high quality bases) assembled on 2008-07-07
> FMO03116.5prime
TACCTTATACGAAGTTATCAGTCGACATGTCCAATGTAGGGAAAATAAAG
ATAAGATCCATTGCGGATCTGCAGGCCACAGTACGAGTAAATGTAGAACC
GGACCCAACGCCCACGATCGAGAACAGAACGCCGGACAAGAAAAGAGCGG
GAAGAACTCGTGCGGCTTCCACGACAAAAAAGGTCCGACCAAAGACGGAA
GCATGTCCAATCATAGCCAGCACTGCGTTCAAGCGTTCCAGCAAGAAGAC
TCCGCTGCCAGGACAAATGCGCATCGATAGCTTTTTTACAAGTGCCGTCA
AGAACTACAAAGTCAAGTCAAGTTCCTCTTGCAGGAAGGTGGATCCTCCG
TTGGACAAGCGAAAGGTATCTACCAAAGGGCGCAAGCGCCTCTTCGAGGA
GTCTACAACAACCTCATCTGCCTTTACGGGCAAGCTGGATGCAAAGCCGT
CAGAGAAGCGAGTGCAGCCTAGTCGCCGTGCGAAAGGCAAGGAGAACGCT
AGCCTCTCCGAAGTGCACGTAATTGACCTGTGCTCCGAGGACGAGCAGAC
CATAAAAAGAAAGCCATCCGCGATAGCCTCTCCCTGTGAAAAAAGCAGCG
ATGTCCAAGCAACCAAGTTTAGAACTCCAGAGACTTCCATGCCAGAAGCC
AAGCTAAGCAATTCCAGCCTAGACCTAGTGGAAATCTCCCCCCGGTCCCA
ACAAATCCCAACGAATAACTTTTACCGGTCATCGCCGGCTGCAATCACAA
AGGAAAGCCCCCTGGGCAAAAACTCTAAAAAAGGAACTGTACGCAAACAA
AGAAACCAAACCTTGTCCGCCCTATAAAGTAGTGGAAGGGTACATCCTTC
TGCGTTCAACGGCTTTCAGGTTGGGGAAAATAAAGGGGAGTCACACATTA
CTTT
FMO03116.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Snm1-RA | 2589 | CG10018-RA | 52..927 | 27..904 | 4160 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5555135..5556010 | 27..904 | 3970 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:38:48 has no hits.
FMO03116.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:04:01 Download gff for
FMO03116.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Snm1-RA | 42..921 | 19..904 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:33 Download gff for
FMO03116.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Snm1-RA | 48..927 | 19..904 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:21:09 Download gff for
FMO03116.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Snm1-RA | 48..927 | 19..904 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:21:09 Download gff for
FMO03116.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5555131..5556010 | 19..904 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:33 Download gff for
FMO03116.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1380853..1381732 | 19..904 | 98 | | Plus |
