FMO03119.5prime Sequence
856 bp (257 high quality bases) assembled on 2008-07-07
> FMO03119.5prime
CGTATAGCATACAAAAAACGAACTTATCAATCCACATGGATCCCTCCCCG
AGCCTGGCCGACAAGTTGGCCTCCAAAACTGCCATCAACAACTCTCTGGA
CAGCAGCTCCTTTTCCAGTTCGCTGGGCTCCAAGCACGGTGGCGGAGAAA
ACGGCATTCTGCGGGACACGCCCTTCGGCTATCTGGAGGGCGAAAAGGAC
CAGGACCACAAGAACGACGTGACCTACGTGTGTCCGTACCGCGGCCCCGT
CTTCGGCGCTCTTACCATAACCAACTACCGTCTGTACTTCCGGTCGCTTC
CCCTGCGGGATCAGGAGCCGCCCGTCGTCGTCGACGTGCCTCTGGGCGTG
ATCGCGCGTGTGAAGAAAATTGGAGGTGCCACGTCTCGCGGTGAGAACTC
GTACGGCATCGAGATTTTCTGCAAGGACATGCGAAACCTGCGATTCGCCC
ACAAGCAGCAGAATCATTCGCGGAGGACGGTGTTTGAGAAACTGCATGCC
AACGCCTTTCCGCTCTCGTACGATGGGCGCCTCTTTGCATTCGCCCACGC
CACGACCAACTCTGTGAACGGTAACGGAGGCTGGGACGGCTGGGCGGTAT
ATGAACCGCTGGCGGAGCTGCGCCGCTTGGGCGTTCCCACGATATGTGGC
GGGCGACCAAGCTAAACGAGTCCTACGCAATTTGCGACAGCTATCCGGCC
GGTGGGCTGTGCCCATAGCGGCCTTAGATGATTTCCTGATGCGCGCGCAC
AATTCCGATCGCGCTGCCGCCTGCCGGTTTGTCCTGATGAACCCACGGAC
TCAAGCGACCATTACAAGTGATCCCAGACGCTGGTGGGTGATAGTGGTAA
GCGAAA
FMO03119.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mtm-RB | 2230 | CG9115-RB | 205..1031 | 36..856 | 3580 | 96 | Plus |
| mtm-RA | 2067 | CG9115-RA | 107..933 | 36..856 | 3580 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:13:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6035985..6036811 | 856..36 | 3430 | 96 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:13:59 has no hits.
FMO03119.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:03:42 Download gff for
FMO03119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtm-RA | 99..933 | 27..853 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:07 Download gff for
FMO03119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtm-RA | 116..950 | 27..853 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:45:40 Download gff for
FMO03119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtm-RA | 96..930 | 27..853 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:45:40 Download gff for
FMO03119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6035988..6036822 | 27..853 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:07 Download gff for
FMO03119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6035988..6036822 | 27..853 | 95 | | Minus |
