FMO03123.5prime Sequence
573 bp (572 high quality bases) assembled on 2008-07-07
> FMO03123.5prime
TATACCAAGTTATCAGTCGACATGGACTTCGCTAGCGTACTCGGTAAGAG
CGAGGCGCATCAGCGCACCATTATCCACCTGGACATGGACTACTTCTACG
CTCAGGTGGAGGAGATTCGGGATCCAACGTTGCGGTCGAAGGCCCTGGGC
ATTCAGCAGAAGAACATCGTGGTCACCTGCAACTATGTGGCGCGGGCCAA
AGGAGTGACAAAATTGATGCTTATTGCAGAGGCACAGCGCATCTGTCCCG
ATTTGGTTCTTGTCAATGGAGAAGACCTCGCCCCTTATCGGCAGATGTCG
CAAAGAATCTTTGACCTCCTGCTTAACTACACTCCCCTAGTGGAGAAGCT
AGGCTTCGATGAGAACTTTATGGATGTGACTGCACTTGTAGAACTGCGAC
AGGCTCACGTTGCTGAGGCCCTGTTGAGACCACCGGTGGGTCATACGTAT
CCGGCGGATGGTACTCCCTTGTCAAATTGCGATTGTGGCTGTGCCCAGCG
GCTGGCCATCGGCACTCGGATCGCCCAGGAAATCAGGGAGGAGCTCAAGC
TCCGGCTGGGAATTACCCTGCTG
FMO03123.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:09:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| DNApol-iota-RC | 3144 | CG7602-RC | 85..635 | 22..573 | 2735 | 99.8 | Plus |
| DNApol-iota-RA | 2622 | CG7602-RA | 150..700 | 22..573 | 2735 | 99.8 | Plus |
| DNApol-iota-RB | 2544 | CG7602-RB | 72..622 | 22..573 | 2735 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:09:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8234266..8234811 | 22..567 | 2730 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:09:22 has no hits.
FMO03123.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:03:40 Download gff for
FMO03123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DNApol-iota-RA | 99..653 | 18..573 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:54 Download gff for
FMO03123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DNApol-iota-RB | 68..622 | 18..573 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:23 Download gff for
FMO03123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DNApol-iota-RB | 68..622 | 18..573 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:49:23 Download gff for
FMO03123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8234262..8234816 | 18..573 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:54 Download gff for
FMO03123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4059984..4060538 | 18..573 | 99 | | Plus |
