FMO03127.5prime Sequence
820 bp (818 high quality bases) assembled on 2008-07-07
> FMO03127.5prime
CCTTATACGAAGTTATCAGTCGACATGATTTGCAAACAGGACGTTCTGCA
GTGGTTTGAGAAACTCGAGAGCTACAATCGGATCGAAACGATGTACGCCC
TGCTCACCGCCTGCCTGCCATTCGAGCTGCGATTTTTGGGCACGCTCCTC
GAGGAGCAGGGCCGTTGCGACTCGGAGACGCTGCGAGGCATGGAGCTGCG
GGCGAATAACCCGCACGAGCTGGCCGCCGACATGGTGAACTGCCAGAAGG
GCGATCCCACCGACCGGAAGATCCGGCGCAAGATGGCCCTGTATCTGGCG
CTTATCCGTGCCTGCAATCGGAACTGCGTCAGTGAGATCTACCGCACGCT
GGAATGCTGGGGCGAGTGCGATTTCAGTTGCATTAATGATCAGGACACGC
TGTTGGAGCTGCTGCTGGTCTACACGATGGCAGCCATCCACCCGGTGTTC
TCCATGGAGGAGCAAAAGAAGATTTTCGGCATTCTGGCTAAGATCAAGGA
GAACAAGTTGGTAGCAGAGCGATTCGCGCCTCAAATGCAAAGACAGACAC
AGACGCCAGTGCTCCAGCATCCTCACCCGCCGTCCCCACATGACCTGGTC
ATTCAGCAGCAGCCACCACACGTGATCCACCAAATACCAGGACCGCAGCA
GGCGCCCCCGCACCCGCAACATCCTCAAATGGTGCAGGTACTGCAGACGC
CGCAGGGCAACATACCCATGATCTTTCCCCAGCACTTTCAAAAGCTTCTG
CCCAGCTCTGATGGAACGCACCAGATCAGTGTTGATGGCATGCCGCACCT
GATGCAGCCTAACATCACCA
FMO03127.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10492-RB | 4096 | CG10492-RB | 774..1569 | 25..820 | 3965 | 99.9 | Plus |
| CG10492-RA | 4507 | CG10492-RA | 774..1569 | 25..820 | 3965 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19054851..19055570 | 25..744 | 3600 | 100 | Plus |
| 2L | 23513712 | 2L | 19055627..19055704 | 743..820 | 375 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:40:41 has no hits.
FMO03127.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:03:45 Download gff for
FMO03127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10492-RB | 765..1565 | 19..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:54:53 Download gff for
FMO03127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10492-RA | 768..1568 | 19..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:14:36 Download gff for
FMO03127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10492-RA | 768..1568 | 19..819 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:14:36 Download gff for
FMO03127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19055629..19055703 | 745..819 | 98 | | Plus |
| 2L | 19054845..19055570 | 19..744 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:54:53 Download gff for
FMO03127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19054845..19055570 | 19..744 | 99 | -> | Plus |
| arm_2L | 19055629..19055703 | 745..819 | 98 | | Plus |
