FMO03134.5prime Sequence
1236 bp (1036 high quality bases) assembled on 2008-07-07
> FMO03134.5prime
TATAGCATACATAATACGAAGTTATCAGTCGACATGAGTGACGACGAGGA
GCACTACGAACCAAAGGCACACAAGAAGCTGCTGCAGGCCATCGGCAGTC
TGGGCAAGGTGCAGCACATCCAGAAGTCCACGCGCGACGAGCGGCAGTCG
CTCCAGGATGAGTTCCAGCTGGTAAAAGGTGTTTCGTCAGCGGAAACGGA
TCATGCCCCCAGAGCCGTGGGTCTGAACGATCTGGTAGACATCCTACGCA
CCTCCACCAAGCACAGTCAGACGGGCAAGAAGCTCAAGAACATCCATGGC
AGCAAAAAGGTGCTACAGAAGCCGCTGGAGAAACCAGCTGCGGATCGAAT
TAAACGGACCATTGGCTACGAGGGAGTTACCAAGAAACTCGGTCGTTGGG
ATGCTGTGGTGGCTCAACAGAGATCTGCGGAGACGCAGATCTTCCCCCTA
CCATCTGAAACGGTTTACGTAAATACTGCGGCAAATGCCAGGCCTCTAAA
CACCCGGGTCAAGTCCAATCTTGCTCAAGAACTCGAGGCTAACAACCGTA
AACTACGGGAACTGCGCAAAGCGCAAATTGGGGATACCACGGATGAAAAG
GAGCTGGCCAAGCAAGAGCGGCTTTTACTACAAAAGAAGCTTACCAGGGA
CGAACTATTTGCCCGTCGCAAGGAGCTAGCTTACCTGAAGATGCGCGAGT
CTCAAAAGTCAGCAAAGGCGCGCATGCAAAACAAAATCAAATCGAAAAAG
TTCCACAAGCTGCAGAAGAGACAAAAAATGTTGGAGCAGATGAAGGAGTT
CGAGTTGCTGCAGAAACCGATCCAGAGGCGGCGCTGGAAAAGCTTAATGC
CCTGGAAAAGAGTCGAGTGCAGGAGCGTGCCAGCCTGCGGCACAAGAACA
CCGGTACTTGGGCGAAGAATCTGCAGATACGGGCCAAGTACGACAAGGAT
GTGCGAAAGGATCTGGCCGAGCAGTTGGCTGTAGCAGGGAACTGACCCAG
AAAAGCAGTGTCAGACAGCGAAGATGAAACCACAAGAGAGAGTTTTACCC
GAGGAGGAGGATAATGACTACGATCCCTTAATCCTGGACAAAAAGAAAAG
CTACGAGCAACGGAAATGAAATGGTGAAGTGAGGTCATGGCGGCCAAATT
GGGACAAAAGGCATAACGAAAGTACTGAGAGACTCGTTAGGGAATTGCAA
GGAGTCTCGGGATATGTAGCCAGCAACAGAGGAGTC
FMO03134.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12301-RA | 2515 | CG12301-RA | 91..1204 | 34..1134 | 5245 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15581351..15582027 | 436..1104 | 2990 | 98.5 | Plus |
| 3L | 28110227 | 3L | 15580890..15581294 | 34..438 | 2025 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:21:41 has no hits.
FMO03134.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 14:59:56 Download gff for
FMO03134.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12301-RA | 49..1162 | 34..1134 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:07 Download gff for
FMO03134.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12301-RA | 91..1204 | 34..1134 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:12:13 Download gff for
FMO03134.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12301-RA | 91..1204 | 34..1134 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:12:13 Download gff for
FMO03134.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15580895..15581294 | 39..438 | 100 | -> | Plus |
| 3L | 15581354..15582030 | 439..1106 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:07 Download gff for
FMO03134.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15573995..15574394 | 39..438 | 100 | -> | Plus |
| arm_3L | 15574454..15575130 | 439..1106 | 98 | -> | Plus |
