FMO03136.5prime Sequence
1261 bp (970 high quality bases) assembled on 2008-07-07
> FMO03136.5prime
GTATAGCATACAAAATACGAAGTTATCAGTCGACATGATGGAATCCAGAT
CGTACCTCAGCCTAAGCTGGCTGCTTCTTCTTCTGTGCAGTACAGTATGT
TCTGCAAATCCCAATCTCGAGATCATGAAGCGAATGCTAGACGACATGGA
TGAAAAAGTCGAACCATGTCACAATTTCTACAACTCCTCCCAAAAGAATC
TCAAGTGGCATGCATTTGCGACGGTGAGCGATCAGTTCCAACTCCTCTTC
GACGGAATTGAGAACGAGGTGTTCGAGAAGCACAGCTTCGAGGAAAAGTT
GCAGCGTCTATACAAAATCTGTTCGACCATGGAGAGACCCAGTCTTCTGA
GGTATTTTGAGCTGGTGAAGCCGGGAGAAGATCTCAACTGGCCCTTTCTG
ACGCCCCGAGGAGGCAAGTGGCCCAAGGAGAAGTTTCAGTGGATGGAGGC
ACTGGCTCGACTGCGTCGGTACGGCTTCAATGACATCATGTTTGGAATGA
GTATAAGACAGGATCCGAACAGTGACAGTGGCCAACCCATAGTAGTTTTT
GAAAAAAAGTACGATTCTCTATTCCGTTTCATAGAGTCGCTGCAAAAATA
TTGGTCTGCCACCAAAATTGGCAAAGGAGATAGCGCCTCTGGATAATGCC
ATACAAGAAATGTACAAAATCAGATATGAAATTTGAACACTATGCACGAG
ATGCAGCACCAGTGAAACGGATTAGTCTAGGGCAGTTGGAAATTTATGGG
GTGTCCCTAACCAAGTATCTGGAGATCGTCTTTCGGACGCCCCTTTTCGC
CGGATTTTGTAGTGCATGTGGAGAATCTGTACTACTTACGGGGGCTCCAG
AATTTGATGACTGCCGTTCCGAGCCAGGTGGTGGCCAATTATCTAACGGC
ACGCTTCACTTCTATATAATGTTCACGTTCATGAAGCATGGAGATTCATG
CGTGACTACAATGCGCCCATTCATGGAATTCCGCCAGCAATCTTGCTGTT
CGAGGACCAAATTCTGGGAACCAAGAAGCTTGCTTACCTTTCAACCCGGC
CGGCAGAATTTTGGATGCCATACGCCAGCAGCTAACCTCCGGGCTCGAAG
GAACGTTCTTAGCTGGCCGCCCGTCTGAGAAATTCCTTACTGCCAAAGAA
GGTGAATGCCGACCCTGACCCATCGCGCACTCGCGCGGAAGCCTACTTCA
CACGTTCGAAACCCCGATACTCATACAGAGACCTGGTGAATATGGCGCGA
CGAACACTCAG
FMO03136.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31918-RA | 2267 | CG31918-RA | 113..1232 | 35..1158 | 4975 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5057017..5058136 | 1158..35 | 4685 | 96.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:36:52 has no hits.
FMO03136.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 14:59:58 Download gff for
FMO03136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31918-RA | 91..1180 | 21..1111 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:53:35 Download gff for
FMO03136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31918-RA | 98..1187 | 21..1111 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:12:17 Download gff for
FMO03136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31918-RA | 98..1187 | 21..1111 | 97 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:12:17 Download gff for
FMO03136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5057062..5058151 | 21..1111 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:53:35 Download gff for
FMO03136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5057062..5058151 | 21..1111 | 97 | | Minus |
