FMO03141.5prime Sequence
1222 bp (1019 high quality bases) assembled on 2008-07-07
> FMO03141.5prime
TATAGCATACATTATACGAAGTTATCAGTCGACATGTCGCTCACCGATGT
CTTGGAATTGAACAAAACGGAGTTGTTCGCGAAGATTCGCAATGGGTTGC
CCGTGGTGCAAAGGACTCAGAACCTGCTGGACTGCAAGGACGATCTGCTC
TTTGCCTGGCACGCGAAGGACAGCTGTCTGTTGGTTCGCAACTGGCGCTC
ATCGCTGGCGGCAAAGGTGAATATCCAGTTCCAGACACTGATTCCATCGA
GCTTGGTGAGCCTGGAGGTGGACCGCGTGCTGGCCTCCAACGAGGGCTCC
CTCGTGGCACTAAGTGGACCGCGCGGCGTTGTCATAATGGAGCTGCCCCG
CCGCTGGGGCCCCGATGGATACTACAAGGATGGCAAGCCAGTGATCACCT
GCCGCACGTTCGGCCTGGACACTCAGCTTTTCCTAAAAAACCCGCACTTG
GAAGTGCGCCAGGTCCGCTGGCATCCGCACTCCGTGTCAGACTCCACGCT
GCTCGTGCTGCTCAACAACAACACGATTCGAGTGTACAATCACTCCAAGT
TGCGCCACGTGTGGCAGGTGGGTCCCCCGGTGCTTCGAAGTGGGGCCAAT
AACTCGCTATGCGACTTTGGCGAGCTAGCCGTTGACTTTGACATCGCTCC
TGCTGCAAAACCACGTGTCACTGAACCAGAAACAGCCGGCAATAACGAAA
CCACTTTGGATAAGAGCAACAAAACCCTTGTGGCGGCCAAATCGCTGCCG
AAACAGGAGAGGATAGAGTGGCCCATGGTTGTGCTCCGCGAGAATGGAAA
CATCTACATTTTGATGACCGGCGTGGATTCGAGAATACGCGCCTGCAGGG
CCCCGTTACCATACGCCACAGGCACATGACAATTATGGACTGGAGTCCTG
TGCCCTAATGATATCCCATCACTTCCGCCGACCATTGTTATAGCTGAATC
AATGAAAGCTTCACCATGCTCTGCTATGGAGGCGAGCCACTGAGCATTCT
TTCAATGAAGTTGACGACTTCTGTGTTGATGAAACCGCCGAAATACGTGG
TACATGTACTAGAAACTGTCGAACTTGAACTGGAATATTCTGCACTCGCC
ACTGGAAAAGGAAGAAAGCAACTGTTCATATCCTAAAGCGGAATTGATCA
ATGAACTGCTACTTGCTAACAAAGAAGACTTCATGCGCTAACGGTTCGCT
TATTGCAAGAACGTGCACACAC
FMO03141.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mbo-RA | 2566 | CG6819-RA | 52..1193 | 34..1164 | 5085 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12677918..12679001 | 1110..34 | 4775 | 97.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:13:02 has no hits.
FMO03141.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:00:00 Download gff for
FMO03141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mbo-RA | 38..1148 | 26..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:22 Download gff for
FMO03141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mbo-RA | 46..1156 | 26..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:01 Download gff for
FMO03141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mbo-RA | 46..1156 | 26..1131 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:01 Download gff for
FMO03141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12677919..12679007 | 26..1110 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:22 Download gff for
FMO03141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8503641..8504729 | 26..1110 | 97 | | Minus |
