FMO03144.5prime Sequence
1230 bp (953 high quality bases) assembled on 2008-07-07
> FMO03144.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGATCTCAATGA
CGCAGTGCTCACCTGTGCGGTGAACATGGAGTGGACCAATGCGGTGGGCA
TCACGGGTCGCAAACTGGCCTACAAGACTGCCACATTGCGCCTGGTGCGG
AACGATTTGCGTGAATTGTTTGTTGAGGTGACGCCGGAGAAACTAAAGCC
CCTGAAGTTCAAGCTGAAGGATCTGATGGTGCACAAGAAGTTCATGTCCG
AGGGCAAGGCCACCTTCAACTTCAAGGCGGAGAAGTGCACCCTCTATCTA
TCGAATGCACCGCCGGGGACTTTGATGTTCTTCCTGCGGACGATCTTCGT
TAAAATGAACGGAAACGAGGGAGGATCCCAGCCGGACGATGCGACCTTGC
AGAAGAAACTCCGCGAGCACCTGATGTCAGGCAAGCCAAGCAGCTTTAAC
GACGTTTCTCCAGTCACCACGGCCGAGATGATTTTGGCGCGCAAAAAGGC
GGGTTTGTTGTCCAAGGGGTCAGTGACCACGCCGTCGCCCCAGGGCGCCA
AAAAGCGTCGCTTCGAGGAGCTCAAGGAGGAGAAGGAACGGGGCACCATG
CCCGCGGCCAAGAAACTATATGCGTCGACTACCGACGAGTCGCTGAGACT
CAGTGAGGAGCAAATGGAAGTCCTGCGGGCGTGCACCTCGGGCAAGAGCG
TATTCTTCACCGGTTCAGCAGGCACTGGCAAGAGTTTCTTGCTCCGCAGA
TCATCTCAGCCCTGCCGCCCGATGGAACGGTGGCCACGGCCTCACGGGAG
TGGCAGCCTGCCTGATCGGTGGGACCACCTTGCACGCCTTCGCTGGCATA
GGAGGAGGAGACGCCACCATGCAGCGGTGTCTGAAGCTGGCTTCCCGACC
CGCAAATGCCCAGACGTGGAGGAAGTGCAGCGGTTGATTATTGACAAAAT
CTCCATGGTGGAAGGACAGTTCTTTGAAAAAATATGAAACCGTCGCACGT
CACATTCCGCCGCCATGATCCCCCCCTTGGCGCCATACAGCTCATCCTTG
TGTGGGTGCTTCTTGCACTGCTTCATCATAAAGGAAGATATAGGGGCAGC
CCCACCTGCCGCCCAAGACGATTCTGCTTCGTCCTCGATGGAACTTGCTT
CCAATGTTTCACAACCTGAACAGTGCATTGCAATATCGGATATTCCGGGA
CTTGGCAAGGATTTCTGAAACTCCATTCTC
FMO03144.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:33:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3238-RB | 2611 | CG3238-RB | 106..1210 | 32..1129 | 4885 | 96.8 | Plus |
| CG3238-RA | 2529 | CG3238-RA | 106..1210 | 32..1129 | 4885 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:33:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3468951..3469899 | 977..32 | 4520 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:33:22 has no hits.
FMO03144.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:00:02 Download gff for
FMO03144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3238-RA | 106..1126 | 27..1048 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:39 Download gff for
FMO03144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3238-RA | 103..1123 | 27..1048 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:05 Download gff for
FMO03144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3238-RA | 103..1123 | 27..1048 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:18:05 Download gff for
FMO03144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3468950..3469902 | 27..978 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:39 Download gff for
FMO03144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3468950..3469902 | 27..978 | 98 | | Minus |
