FMO03145.5prime Sequence
704 bp (704 high quality bases) assembled on 2008-07-07
> FMO03145.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGCGAGCCCAGGAT
CTGCTGCTGCTTGCCACCGCTTTAATCGGCGCTTACCTACCGCTCACCGC
CGCCTGTTCCTCGCGTGCCATCGCTAAGCCGCGGCCAACAGCTGCACCGA
TCCTGCCGCCGGATAATGTGGAAATATCCACAACGCCGAGACCGAATGTC
ACCTTCCCGATCTTCGCCTGTCCACCGACCTATGTCGCCTGGTATTGCCT
GAACGATGGCACCTGCTTTACGGTGAAGATCCACAATGAAATCCTATACA
ACTGCGAATGTGCGCTGGGATTTATGGGTCCGAGGTGCGAGTACAAGGAG
ATTGATGGCTCGTACCTGCCAACCAGGAACCGTGTGATGCTAGAGAAGGC
CAGCATTGTTAGCGGAGCAACGCTGGCCCTTCTGTTTATGGCCATGTGCT
GTGTGGTTTTGTATCTGCGACACGAGAAGCTGCAAAAACAAAAGCTGCAC
GACAGCACCACAACCACAACGACCGACGGTGGCTGTCAGAACGAGGGCAT
GGACGAGGTGGATGGCTTGCGACCCTTACGTCCAGTGAGACGTCCCTTTG
GACCCTGCCGCATCCTATCGCTGGAGGAGGCCCACCTTCAAGCGAAAGCC
TCCAATCGCCCCAGGCATTGCAACGAACTTTTGCGCGCAAGCTTTCTAGA
CCAT
FMO03145.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:39:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Krn-RA | 1354 | CG32179-RA | 384..1034 | 36..686 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 17649882..17650532 | 686..36 | 3255 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:39:25 has no hits.
FMO03145.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:04:10 Download gff for
FMO03145.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Krn-RA | 367..1035 | 22..693 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:45 Download gff for
FMO03145.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Krn-RA | 371..1039 | 22..693 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:21:31 Download gff for
FMO03145.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Krn-RA | 371..1039 | 22..693 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:21:31 Download gff for
FMO03145.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 17649877..17650545 | 22..693 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:45 Download gff for
FMO03145.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 17642977..17643645 | 22..693 | 98 | | Minus |