FMO03148.5prime Sequence
1214 bp (904 high quality bases) assembled on 2008-07-07
> FMO03148.5prime
CGTATAGCATCCTTTATACGAAGTTATCAGTCGACATGGGAACTAAAAAG
GTCAAAATCAGCTCGGTCAAGCGGGCTGCTCACCTGAAGTCGAAAAAAAC
ACCGCTTTCTAAGCAGCAGCAACAAAAACAGAAGCAAAAGCGCGACCAAC
TGAAATCGAAGCGCGAACAGGGTCAGAATATATTCTCCCAAAAGGCGAGA
AAGCGGGACAACTTAGCACAGCGTAAAAAGCACAACAAATTGGCCTCCCT
GGGCTTGGATCCGCTCGAGGAAGACAACGAGGATGGCGACGATGAGATGC
TTGAAAACGTTGCGGACATGCTGGATGGCGATGATCTTGCCCTGCTCCAG
GCTAACAAACGCAAGCGAAAGGCCAAGACGACCGGCGAGAATGATCCTGA
CCAAGGACAATCCATCGGCTTGGAAAGGGCCTATGCCTCTGACACGAAAA
AAGAGCAGGACGCGCAAAAAATAAAGTTGGATTTGCTGCCAATCAAGTCC
AGGGATGGTCAGATTATCACCCGTACGACAGAGGTGGATTACATACCTAA
GCCCAAGCAGAAAAAGAAGAATGAAGAAGAAGAGGAGGATGATTCCGAGG
AAGACGGTGATACGGAGTATGAGGACAGCGATGACGATGTGGTCAATGAT
GTCGAGGCCGCCACCGCCGCTCCCGTCCAAAAACTTATCTCTACCACGGA
TCTACTTATTGCCCGGCAGCAGGAGATCGAACGCCAGAAGTATCGCATTG
GATCATTTGTTCCGGGCTGCTCGAAAAGCCAGAGGATAAGATGCGCACTT
TCATGCTCTGTACGAACTCATGGACGAAATCAACCCCGCCAGTCGACAGG
CCAACCTAATGGCGTCAGAAAGCTGCCATAATCTCTGTCACCGAGATATT
CAAAGATATCTAGCCGAGTATCGAGTGGTCAGGTCGACCCCAAGATGCAA
CGCTTCCCAGGCCACTCTTGATCGTGTACCTTTGAAACGCCTTGCTTCAC
AGTTAAAAGTTCCTGCAAAAACTGGAACGATCACAGCCCAGTTACAGGAG
AGGTGCTTAGACCCCTCCAATGTAAGGTTGGCCACCGTGCCAGTACAGCA
TGGTGAATGCCTTGGGCAATCCTAACTAACCACGTAACCATGCCGTCTGG
CCTAGCTAATTGCATAGCCAAAATGCCCAACGGCGCTCCTACGGCCTCGC
CACGCACTCTTCTA
FMO03148.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1234-RA | 2572 | CG1234-RA | 87..1169 | 36..1098 | 4740 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7245826..7246822 | 1028..45 | 4295 | 98.2 | Minus |
Blast to na_te.dros performed 2014-11-28 23:00:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6786 | 112..178 | 119 | 64.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2631..2677 | 111..160 | 117 | 74 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6777..6835 | 112..170 | 115 | 66.1 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1068..1129 | 112..170 | 113 | 69.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6756..6819 | 112..178 | 112 | 65.7 | Plus |
FMO03148.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:04:07 Download gff for
FMO03148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1234-RA | 85..1178 | 36..1106 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:25 Download gff for
FMO03148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1234-RA | 87..1180 | 36..1106 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:46:56 Download gff for
FMO03148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1234-RA | 87..1180 | 36..1106 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:46:56 Download gff for
FMO03148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7245738..7246822 | 45..1106 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:25 Download gff for
FMO03148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3071460..3072544 | 45..1106 | 96 | | Minus |
