FMO03152.5prime Sequence
1236 bp (1077 high quality bases) assembled on 2008-07-07
> FMO03152.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGTTTGTCCAGGAT
CTGCGCAACGACTTTTACCGCCAGCTGGTTGGCAAGCGCATCTTGATCGT
GGTCAACTACGACATCGATGCCATCTGCGCCAGTCGCATCCTGCAGGCCT
TGTTCAAGTACGATCACATGCTGTACACCGTGGTGCCCATAATGGGCGTT
ACGGGTCTGAAGCGGGCCTATGGAGAGCACCAGGGCGACGTTAAGTACGT
GGTGTTGGTGAACTGCGGCGGCTGTGTAGATATTGTGGAGCTCCTGCAGC
CGTCGGACGACGTGACCTTCTTCATATGCGATGCACATCGCCCGTTGGAT
GTGTGTAACATCTACAGCGATCGGCAGGTGTGCATCTTGGGGGATGCCTC
CTTGGAGGAGAATATTCCAGCGTTCGAGACAATTTTCTATGACTCTGAAG
GTGAAGACGAGGATGAGGACGAGTCCTCTGACACGGAACAGCAGCACGAC
GACAGTGGTGCCGGGGAATCGGACCAGGAGGATCAGGCGCCAAGGAGCCG
TAAGCTCAGTCGCCTGGAGCGGCACGAGCAACGCATCCTGAAGCAGCGAG
CCCGCCGACAGTGGGAGTCTGAGCGCGACAGGATTATGTTCGAGTACACG
CAGTTCAGCTACTACGGCAGGTCCGCCGCTTTGATGGTTTTTGAGTTGGC
CTGGAAGCTCTCAAAAGACAACATGGACCTGCTCTGGTGGGCCATTGTGG
GCATCACGGAGCAGCTGCTGCTGGGCAAGATCGAGAGTGGAGCGTATACT
TTGGAGCTGGAGCAAATCCAGTCGCATGTGTCCCGACTGACGAACAAAAC
GAATGATCAGAACACGATGAGTGCCTCCAAGATAACCTTCGAGAATGATT
TGCATCTGGTCTTGTACCGCCACTGGCCCGTCACGGAATCCATGAGGTAT
TCCCGCTACTCTCATGCCAGCTGAAGCTGTGGACACTGCGCGAGAAGAGA
GATTACACGAGCTGCTGCTCGAGAATGGGACTTCCCTTGGTGCACGCCCG
CCAAACGTACGGAGCATGGATTTGGTGTTTGCGCAAGGAGTCTTTCTCGA
TGGTGGACGCTGGCCGAAAGTACGACTAACGAACTATTTACGTACCTTAC
CTGAGCTACGGCTACGGACAATGCTGGGCGGAATCGATATGCCTGGCTCG
CACTCTGGAAATCCGTTGGAAAGCCAAGACTCTCAG
FMO03152.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:09:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CDC45L-RA | 2214 | CG3658-RA | 229..1369 | 35..1165 | 5230 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:09:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1029415..1030328 | 948..35 | 4555 | 99.9 | Minus |
| X | 23542271 | X | 1029203..1029366 | 1107..945 | 520 | 94.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:09:40 has no hits.
FMO03152.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:04:12 Download gff for
FMO03152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CDC45L-RA | 242..1392 | 27..1174 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:00 Download gff for
FMO03152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CDC45L-RA | 250..1400 | 27..1174 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:34 Download gff for
FMO03152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CDC45L-RA | 225..1375 | 27..1174 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:49:34 Download gff for
FMO03152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1029417..1030332 | 27..946 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:00 Download gff for
FMO03152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 923450..924365 | 27..946 | 99 | | Minus |
