FMO03167.5prime Sequence
1228 bp (1085 high quality bases) assembled on 2008-07-07
> FMO03167.5prime
TATAGCATACATAATACGAAGTTATCAGTCGACATGAAAAAGGCGACTAC
TTCCGCGGCCGCCAAGTCTCAAGGCAACAGCAAAATGCAGAAAAACGCAA
ATAACGGCACAGCTAAAGACAAGAAGAAGCCCAATCTAGATAAAGAATCG
AATGATTCCAATTCGGTATCTGATATGCTCGCCGTAACCAAGGACCAAGA
GGTGCATGCCTTTTTCTCTAAATTATTCGACGATGACGCCGGTCCATCAA
CATCCAAAAAGACCCAGTCAGGGTCAGCCGCAGCCGCTAAGACCGCAGAT
CGCAAGCGACGTCTTCAGGCCGAGGCGGATGCCAACAATAATGATACCGG
AAAAGCCGGTAAGTTGACCAAGGAATCGGAAGCTACTCAAGGAGCCAGGG
CCACCAAACGCAAGCAAGCACGTAGTCTGGGACTGGAGCGCACCTCGCCG
ATCCAGGTTAATGGCGCGGCTTTAGCCTGCCCTTTGGTGCGCAAATCGCT
GCCCCCAGGGGAGGCCAATTCCTGTCCTCAGCCGCCCAAAAAGGACCCAG
CAGCCGTGAACTCATTAGTTAAAATAATTAAGGCGGAACCCACCGAAGAG
GGCAATAATAACAATGACGAAAAGGAGACTGAAACAATAGAAACTCACAA
AGCCGACAGCGTCGAAGAGGGTCGTCGCGTCCTGCAGTGGATACTCTTTC
CGGTCCAAACTAAAGTCTTCTTCAAAGACTTCTGGGAGCACACCGCCTGC
CTGGTGCAGCGCTCTAATCCCAAATACTTTCAAAGTATGATATCATTCAA
GATGCTTGACGAAATACTGATTCGCCATCATTTGGACTTCCACCGTCAAC
GTGGATGTGACCACTTACAAGAACGGCAAGCGTGAGACACTGAATCCCGA
GGGTCGTGCCTTGCCACCAGCTGTGTGGGGCTTCTATTCGGACGGCTGCA
GCATTCGTTTACTGAATCCTTTCCACCTATCTAATTCGCTTGCGTCAGTG
TGCACGTTTGCAGAGTTCTTTCACTGCAAGTGGGGGCAAATCTATACTAA
CCCACCCAATAGCCAGGGCTTTGCGCTCATTACGATGACTCGAAGCCTTT
CGTTATCATTGAGACCAAGGCTGCCTTTTGTACATCGTCAAAAGCCGATC
ACTGGCCAGGATTCGTCGGCAATAGATCAAACGCTGGTAAGCCCTAATTG
TATGAGAACTATAGCCCGCAAAGTATCA
FMO03167.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2982-RC | 2242 | CG2982-RC | 125..1204 | 34..1107 | 5085 | 98.7 | Plus |
| CG2982-RB | 2246 | CG2982-RB | 129..1208 | 34..1107 | 5085 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4319628..4320707 | 34..1107 | 4845 | 98.2 | Plus |
Blast to na_te.dros performed 2014-11-28 20:12:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dtak\R1A2 | 1753 | Dtak\R1A2 TAKR1A2 1753bp | 221..278 | 1073..1130 | 119 | 67.2 | Plus |
FMO03167.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 14:59:41 Download gff for
FMO03167.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2982-RA | 74..1153 | 34..1107 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:09 Download gff for
FMO03167.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2982-RB | 129..1208 | 34..1107 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:41 Download gff for
FMO03167.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2982-RB | 129..1208 | 34..1107 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:41 Download gff for
FMO03167.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4319621..4320707 | 29..1107 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:09 Download gff for
FMO03167.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4213654..4214740 | 29..1107 | 98 | | Plus |
