FMO03174.5prime Sequence
1033 bp (928 high quality bases) assembled on 2008-07-07
> FMO03174.5prime
CGTATAGCATACCTTATACGAAGTTATCAGTCGACATGGCCCAATTCGAG
AAGGAGATCGTTCAGGCGGTGCTGATCGCCGACAACAATGTGTGGAACTT
CAAGCCCCTCTCCGACGAGGGCTCTACGGCCCTGCTGCCGCTGGTCAACG
TGCGGATGCTTGACTACGCTCTCATGGCGCTGAACCGCAGCGGCGTGGAG
GAGGTGTTCGTGTACACCAGCCTCTATCGCTCGAGCATCCGGGAGCACAT
CAGGGCCGGCATTGCCACGGACGCAGCCTGGTCATTCAAGATGACCGTCC
ATGTGATTGGCGGCGAGGGTTGTCGCTGCTTCGGCGATGCCATGCGTGAT
TTGGACAATAAGGCGCTGATCCGTGGCCACTTCATTCTGCTCGGCGCCGA
TACGGTGACCAATGCCGATCTGCGCCCAGTGCTGGAGCAGCACAAGCGGC
AGGCCAAGTTCGACAAGGGCACGGCCGCCACGCTGGTGTTCAAGGAGTGT
GCCAACAATGTGCGCACTGGCAACGAGGTGCTGATCGCCGTGGACCGTCG
CAACGACCGGCTGCACTACCACCAGCGGCTGCGGATGCACCACAAGGAGA
ATCGCTACCAACTACCACTAGATGTCTTTCTGGGCAACTCGTGTGTGGCG
CTGCACCACAACCTCCTAGATCCGCAGATTGCCATTGGCTCGCCCTCAAT
GCTGTCCCTGTTCAACGACAACTTTGACTTTCAGACGCGTGATGACTTCG
TCAGGGGTTTGTTGATAAACGAGGAACTGCTGGACAGCATGATATATGTG
GCACTGCACCCGGCAGCCCAGTACGCGCACAAGTGAACAACTGGCCGGCC
TACCAGGCTGGTTAGTCGGACATTATCAACCGGTGGGCCTACCCCCTTCG
TTCCGGACATAGGCCTTATACAAGCTGCAGCAGAAGTACGTCCTCCACAA
GGACAACATTCTACAAAAGCCCCGAGGCGCATGTCTCGAAAGGTGGCTTT
TGCCTCCAAAACGTGGTCCATCGAAGCGGGGCA
FMO03174.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF2B-epsilon-RB | 2447 | CG3806-RB | 52..1040 | 36..1030 | 4645 | 98.4 | Plus |
| eIF2B-epsilon-RA | 2297 | CG3806-RA | 52..1040 | 36..1030 | 4645 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1921733..1922472 | 992..251 | 3345 | 98.5 | Minus |
| X | 23542271 | X | 1922542..1922668 | 254..128 | 635 | 100 | Minus |
| X | 23542271 | X | 1922730..1922823 | 129..36 | 470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:40:47 has no hits.
FMO03174.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:03:55 Download gff for
FMO03174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF2B-epsilon-RB | 34..1028 | 29..1032 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:54:55 Download gff for
FMO03174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF2B-epsilon-RA | 57..1051 | 29..1032 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:14:38 Download gff for
FMO03174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF2B-epsilon-RA | 47..1041 | 29..1032 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:14:38 Download gff for
FMO03174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1921698..1922469 | 254..1032 | 97 | <- | Minus |
| X | 1922543..1922667 | 129..253 | 100 | <- | Minus |
| X | 1922731..1922828 | 29..128 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:54:55 Download gff for
FMO03174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1815731..1816502 | 254..1032 | 97 | <- | Minus |
| arm_X | 1816576..1816700 | 129..253 | 100 | <- | Minus |
| arm_X | 1816764..1816861 | 29..128 | 96 | | Minus |
