FMO03179.5prime Sequence
1021 bp (781 high quality bases) assembled on 2008-07-07
> FMO03179.5prime
TTCGTATAGCATATATAATACAAAGTTATCAGTCGACATGAGGATTGTGT
GGAGTAAGAAGCTCTTGCTATGGCTACTGCTGGCTGCCCTCATGGTGACG
GCGTTGACTCTGGGCTTGGTCTTCGGTCTGAAGAATCGGGACACGCTGTA
CATCAGCGGAGCCGTGGTGTCCAATGGCATCGGATGTGCTGCGGTCGGCG
GTGAAATGCTGACCGATGGCGGTTCCGCCGTGGATGCAGCCATTGCTACG
CTGCTGTGCGAGGGCCTGCTATTGCCGCACTCAATGGGCATTGGCGGTGG
CTTCGTGGCCACCATATATACGCGAAGTAGCCGCAAGGTGGAGACGGTGA
TTGCCAGGGAATCGGCACCGGCGGCCGCGCACAAGGACATGTTCGTGGGC
GAGACGTCGATTACGGGCGCCAAATCGGGTGCGGTGCCCGGCGAGATTCT
TGGCTACTGGGAGATGCATCGTCGCTATGGCATCCTGCCCTGGAAACGCC
TCTTCGAGCCGTCCATTAAGCTGGCCCGCGAGGGTCATGTTGTTTCGCGC
TATCTGGCCGCCGCCATCCAATCCAAGCTGGATAACATTAAGGCAGATCC
CGGGCTCTCGGCCGTGTTCCTCAACGCAACCGGTGATCCCCACTTGGAGG
GCGATTACATGAAGCGTCCCGCGCTGGCCGACACGCTGGAGCGGATTGCC
GAGAATGGAGCCAAGGAGTTCTACGATGGCGGCGAGACGGGGTCGCAAGT
TCGTCGAGGATATCCAGAAGATGGGCGGCATCATTATGAGCATGACCTGC
GCGATTACACGGTGCGCTGGGAGAGCGATGGACACCGTGTCGGCCCTTGT
GAGTGGCACGTACACGCTCTAATCCACGCCCATGCCCAGCATCGGACCCG
TTCTGGGCTTCATCTTCAACCTGATGGCCGATTTTCTATACGACATGAAC
CGATTCTATGGCAGCGCGTGGTGAAAGCCTTTAACACGCCCTATGGCCAC
GCACCCAATCTGGGGTGAATT
FMO03179.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ggt-1-RB | 2212 | CG6461-RB | 290..1266 | 38..1014 | 4450 | 97.7 | Plus |
| Ggt-1-RA | 2396 | CG6461-RA | 474..1450 | 38..1014 | 4450 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18507740..18508683 | 984..41 | 4215 | 97.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:59:17 has no hits.
FMO03179.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:00:09 Download gff for
FMO03179.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6461-RA | 308..1292 | 35..1021 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:44 Download gff for
FMO03179.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ggt-1-RA | 308..1292 | 35..1021 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:46:21 Download gff for
FMO03179.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ggt-1-RA | 470..1454 | 35..1021 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:46:21 Download gff for
FMO03179.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18507702..18508696 | 28..1021 | 96 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:44 Download gff for
FMO03179.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18401735..18402729 | 28..1021 | 96 | <- | Minus |
