FMO03191.5prime Sequence
1225 bp (1044 high quality bases) assembled on 2008-07-07
> FMO03191.5prime
CGTATAGCATACTAAATACGAAGTTATCAGTCGACATGAAAACTGCAACT
CATTGCGCATTTTTAATTATCGCGACTATAGTCGCAATAAGCGGAGCAAA
AGGAGTAGAGGGGGAACGCCCCTACAGGCGGAGCTTCATCAATCCGTATC
CACGCTACCAGTTCTTTGACGATGGTGTCGATCCCGGGGAGCCCCTGTTC
CTGACGCCCCTGATCAACAATGCTTCGATGAGCAAGCAAGAGGTTCAAAA
GCTGGCCCGCGTCGTAGGCTCCCAGTTCCATGGCGTTGAGAGCTACTCCG
GCTATTTGACCGTGGACCCTGGCTTCAAATCCAACATGTTCTTCTGGTAC
TTCCCCGCCGAGCAGGAGCCGGAATATGCGCCAGTGGTCCTGTGGCTTCA
GGGTGGACCAGGTGCCTCCTCGCTCTTCGGTTTGTTCACAGAGAATGGAC
CACTAGAGTTGGATGGTCATGGGAAGCTTCAGAAACGCAACTATACCTGG
AGCAAGACACACAATCTCATCTACATTGACAATCCCGTGGGCACTGGCTT
TAGTTTTACAGAGAACGATGCCGGCTATGCTACGAACGAGAAGGATGTGG
GCCGCAATCTGCACGAGGCTGTGATGCAGCTGTACGAACTCTTCGAGTGG
AGCAACTCCTCTGGTTTCTGGGTCACCGGCGAGTCCTATGCCGGAAAATA
CGTTCCCGCCCTGGCTTACCACATCCACAAGGTACAAAATGCCATAGAGA
CCCGCGTCTATGTGCCGCTCAAGGGCGTGGCCATCGGAAATGGTCTCTCG
GATCCGCTGCATCAGCTGAAGTACGGTGACTATCTCTACCAGCTGGGCCT
GATCGACGAGCACGGACTGCAGAGTTTCCACGATGCCGAGGCAAGGGTGC
TGAATGCATTAAGAGTCACGACATGGAGTGCCGCCTTCGACGTATTTGAT
TCCCTAATCAACGGGGAACTTACCAATGGCCTCACTGTTCAGCAACTTAC
TGAATACACTGGTACTACACTACTTGAGACGCATGATGATGATGGCGCAA
CTGGGCGAATTTCTGCAGGCGGGCGCCACCTCGGCGGCAATCATGTGGCA
TTAGAACTTCATGATCTGGGACAAGAAAAACAGGTGACTCATTGAGAAAG
ATATCTTGAATGTGCTTGGAATGCGAACTGCTGCCACATACCTGTGTGCA
CTCTCGCGCGGGCAGCCTATGTACA
FMO03191.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4572-RD | 1744 | CG4572-RD | 91..1195 | 36..1132 | 5040 | 97.9 | Plus |
| CG4572-RB | 1877 | CG4572-RB | 224..1328 | 36..1132 | 5040 | 97.9 | Plus |
| CG4572-RA | 1793 | CG4572-RA | 140..1244 | 36..1132 | 5040 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19863122..19864170 | 1079..36 | 4780 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:33:33 has no hits.
FMO03191.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 14:59:47 Download gff for
FMO03191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4572-RC | 84..1168 | 28..1103 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:05 Download gff for
FMO03191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4572-RA | 130..1214 | 28..1103 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:21:15 Download gff for
FMO03191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4572-RA | 130..1214 | 28..1103 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:21:15 Download gff for
FMO03191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19863122..19864180 | 28..1079 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:05 Download gff for
FMO03191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15688844..15689902 | 28..1079 | 98 | | Minus |
