FMO03192.5prime Sequence
1269 bp (954 high quality bases) assembled on 2008-07-07
> FMO03192.5prime
TATAGCATACTTTATACGAAGTTATCAGTCGACATGCTGGCGGGTATCAG
CGAGAAAAGCTATGCGGCGGAGGCCCGCTACACGAACTTCTACGCCGGCG
GCGACATCGCCTGGAGCCCGAATGGCCATCATCTTTACTGCCTCAATGGC
TCAGCTGTAAACCAGGTGGATGTGCAGACCTCCCAAATCCTAAATAGCTA
CGGCTTGTCTTCCCCGTCGGCGGATAACAAGAGGCCGGCGGAGCTGGACA
ATATCGATGTGGAGGAGGATACGATTACTTGCTTCGGGCTGTCACAGGAG
CATCTGGTTACTGCCCATCGAAGTGGCCTGCTTAGGCTGTGGCAGCTGGA
CACTGGGAAGCTGGTGAAGCTGTGGAAGGCGCAGCACAAGGGACCAGTCA
TCCGAGTTGAGTTTAGTCCCTGCGGCAGGCTTATCTGCACCAGCGGCGGT
GCAGATGCCACACTGAGGCTGTGGGACTACTCGAACAACAGCTGTCTGGG
TGCCCTCAAGGATTTCCCTGGTCCCGCTTGGCTCCTCGTCTTTCATCCCA
ATGTGCTGCGCAAAGAGATCTACGCCGGAGGTTCGGATAACACTGTCTAT
GCCTGGAACTACGAGACGAAGACACTTGTGCACAAGATGCGAGGTCACCT
GTCGCAAGTCACCGGCTTGAGCTTTAAGAGCAACGCGTCCGACTGCAATG
AAATCGTGACTGTAAGCCGGGACAAGGTTATGATCGTGTGGCAATTGCAG
GAGCAGTTGGAAGCAAGCAGTTGAAGGTTCTTCCCTTGTACGATGAGCTT
GAGGGAGTCGTGTACGCAGACGAGGGACCACTGATAATCGTGGCGAGCGG
ATCGGGCAAGCTGCAACAGGTCCGACCCTAAATCTTGGAAGATCAGGGAT
ATTCTTTCCTCAATCTTGATTTCCAATTAGTAGAACTGCTGCACTGCAGC
CGAGCCTAAAACAGCTGGCCCTGGTCCACTACAGAAGCAGATATTTTTGG
TTCTACGACGTTGAAACCTCTGGAACCCTATTAAACTCTTGGTGGGTTAC
ACGACGAATTCTAGACTGTGTGCTTTATGGGCCAACCGAATCGCTATCTG
GCCGTTTGCCACAACGGCAGCACTTTAAGGCTGTAACAGCCCCGAAACCA
GACATGTGATGTGCCAAGCCTGATCGTGTGGGCTCATACTCGATCCCGAA
TTCCCTGTGCCTGCTATCTCAAAACTGTCGTGAATTTCTGGGGGAGAAAG
AACGCGTCACTGTCTTGGA
FMO03192.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1671-RA | 2523 | CG1671-RA | 64..1158 | 33..1135 | 4835 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9848208..9849248 | 58..1106 | 4305 | 97.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:40:00 has no hits.
FMO03192.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:04:23 Download gff for
FMO03192.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1671-RA | 64..1142 | 33..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:59 Download gff for
FMO03192.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1671-RA | 64..1142 | 33..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:21:56 Download gff for
FMO03192.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1671-RA | 64..1142 | 33..1119 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:21:56 Download gff for
FMO03192.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9848124..9848150 | 33..59 | 100 | -> | Plus |
| 2R | 9848210..9849261 | 60..1119 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:59 Download gff for
FMO03192.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5735629..5735655 | 33..59 | 100 | -> | Plus |
| arm_2R | 5735715..5736766 | 60..1119 | 97 | | Plus |
