FMO03195.5prime Sequence
932 bp (452 high quality bases) assembled on 2008-07-07
> FMO03195.5prime
CGTATAGCATACTAAATACGAAGTTATCAATCGACATGCCACAAAACGGC
TACCAAAATGGAGTCCCTGGCGGGAATCAGGCAAATGGGCACTACGACGA
GGTCAAGCCCACCTATGCCCTGGAGCACTTGGCCACCTTTAAGCTGAAGA
ACGAGGCTGAGGTCAAGCAGCCGAAGGAGAAGATGAAGCTTCTGGTCGAA
TTGGAAAAGACCGGGGGCATTTGGCCGCACAAGATGTTCATGAGCTTCAA
TGGGCAGTGGCTGGTGATGCTGGACAGTGATATGAAGGAGATTGAGAACT
TTCCGGGGAGCCTGATCACGGAGCCCACGGCTTTTATAAGCGATCATCCG
CAGGAGTCATTCAACAATATCCTCATTTTCTCAATGCCCGGAATCTCACT
GGGCAATACCGAAATGCACATCTTCCAGGGGGCCGATGTCAGTTCCGTGC
TCTTGGTTGAGGATCTAAAGACGCTAAGCAAGGGAACCCCTGTGACAGTG
GATCGCAACAAGACGCCCATCCTGCTGCCCAAGCCGGAAAGGTCGCAGAA
CCAGCAGGCCAAGGATCAGTATGGAATAGCAGCTGCTGTGGCCGGAATAG
CAGCCGAAAGAATGCCATAGACAAGGATCAGACCGAGAGGGATGTCCAGG
TGATAAACCACTGCTTCGAGGACATCGAGCGGTTCATGGCCCGTCTTCAT
TATGCCGCCGAGGCGCTTATCGAGCTAAATTGCGCAAGGAACACATAATC
CCACGGGAGGGACTTTTGGTCCTGATATCGGACCACCATTCGAGAGCAAG
TTCATGACATTTTGGCCAAGGCGAAACTGGCCTTATATACTCCGTTTCGG
CTGCATATCAATTCCCTAAGCCCGCCAATCCGGTGCACAAGTCTTCAAAT
CGCTTAATCCTCGTCCCGGTTTGCAACAATAT
FMO03195.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8907-RB | 2360 | CG8907-RB | 101..1008 | 36..932 | 3950 | 96.6 | Plus |
| CG8907-RA | 2368 | CG8907-RA | 109..1016 | 36..932 | 3950 | 96.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17009411..17009804 | 36..429 | 1940 | 99.5 | Plus |
| 3R | 32079331 | 3R | 17009966..17010436 | 473..932 | 1490 | 93.6 | Plus |
| 3R | 32079331 | 3R | 17009859..17009905 | 427..473 | 220 | 97.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:59:23 has no hits.
FMO03195.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:00:12 Download gff for
FMO03195.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8907-RA | 99..1011 | 28..932 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:49 Download gff for
FMO03195.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8907-RA | 104..1016 | 28..932 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:46:25 Download gff for
FMO03195.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8907-RA | 104..1016 | 28..932 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:46:25 Download gff for
FMO03195.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17009411..17009803 | 36..428 | 99 | -> | Plus |
| 3R | 17009861..17009905 | 429..473 | 97 | -> | Plus |
| 3R | 17009967..17010436 | 474..932 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:49 Download gff for
FMO03195.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12835133..12835525 | 36..428 | 99 | -> | Plus |
| arm_3R | 12835583..12835627 | 429..473 | 97 | -> | Plus |
| arm_3R | 12835689..12836158 | 474..932 | 94 | | Plus |
