FMO03208.5prime Sequence
501 bp (473 high quality bases) assembled on 2008-07-09
> FMO03208.5prime
GTATAGCATACATAAAAAAGAACTTATCAGTCGACATGATTGGAAAACAG
CGCCTTTGGCAGACAAGTGTGTTGGGTCTGCTTTTGGCCAGCTTCAGTCT
GTTCTCCGTGCTCTATATGGAGCAAATCGAACGCTGGATGCTGGAGTGGT
TCATGGTGCTCCGCCCAGGAACAATGATCAGCAGCCTGTGGCAGTCACCG
GCCATGGACATAAACGTTGACCTGTACATATTCAACTGGACGAACTCGGA
GAAGTTCAGTGATCCCACAGTGAAGCCCAGGTTCGAGGAGCTTGGTCCGT
ATCGCTTCACCGAACGGATGCAGAAGGTCAATGTGGAGTGGCACGATGAG
AACTCGACGGTTTCCTATCGACGTCGCAGTCGATTCGATTTCGATCCGAA
ACTTAATGTCGGACGTCCTACAGATCCCATTGTGGCGCCCAACCTGCTCA
TTGTGGGACTGTACCAGAAGATGGTCATGTGGAGTCCCATGCTGCGTTCC
C
FMO03208.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7227-RC | 2578 | CG7227-RC | 402..868 | 35..501 | 2305 | 99.6 | Plus |
CG7227-RB | 2128 | CG7227-RB | 402..868 | 35..501 | 2305 | 99.6 | Plus |
CG7227-RA | 2270 | CG7227-RA | 544..1010 | 35..501 | 2305 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7996287..7996753 | 501..35 | 2305 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:27:49 has no hits.
FMO03208.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:06:52 Download gff for
FMO03208.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7227-RA | 505..998 | 1..501 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:25 Download gff for
FMO03208.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7227-RA | 517..1010 | 1..501 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:13 Download gff for
FMO03208.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7227-RA | 517..1010 | 1..501 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:13 Download gff for
FMO03208.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7996287..7996756 | 34..501 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:25 Download gff for
FMO03208.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7996287..7996756 | 34..501 | 99 | -> | Minus |