FMO03220.5prime Sequence
1183 bp (929 high quality bases) assembled on 2008-07-09
> FMO03220.5prime
CTTCGTATAGCATAAGAAGCAAAGTTATCAGTCGACATGAAAATAATTTT
GAGCCTGCTGCTCCTGGCTCTCTCTATCGCTCAGTTGGACGCCTCAAGGT
CAGCCACATCCGACCAGGCTCCCATTGTCGAGTGTCCCGGACGCAGTGTT
CCCCAGCTCCGTGCGGAAGCGTCAGAGTCAGAGATCTCGCTGCTATTTTA
CTACGTGTCCTGGGCCAGCGAAGCACGGCAGGCACGACTGGTCTACAATG
GACTGGCCCACTATTACCAGGAGTATGGCTTCTTTGGAGCCATCGATTGC
TGGCACTTGCAGTGCAATTGCAGCCGTACTTTGATGCCGGCACCAGGAGT
CGCCGGCGCAGGAGGTTATCCTGACAAATGGCCCACGCTGATCGTGCGCT
ACGGCCAAAAGCAGTTACTCCAGTACCAGGGCTCGTGGAGCTTTGAAGAT
CTCGCCCGGTTCATGAATAACCTGCTTCAGCCACTGGACCGGGCACACAG
TAGTCAGGATCTCGCCGCCATTCGGAAGCACTCGGATGCGGTGGTTTTGG
GTCTGCTTGACTCGCCAGACGACAGGCCTACAATCTTTACTTGGCTGCCG
GTCTGCGCTGGCTGGAACTGGATCCGGAGAGGAATATCCGCTTCACCGTG
TACTTTGGCAACAGTGCCAGGAAGATGTTGAAGTCCTCGGAGGCCAAGCT
GCCCCAGTTTGTAGTTATCGACAGCCGAAATGGAGTTCATACGTTTTAAT
GGTACATCTGGAGTATGGAAGACCATCGACATTCTGCGCTGGGTACGGAG
CACACTCAAAATATGTCGCTGTTCTCCAATGGCTATGCACTCCTATGACC
ATCGCCATGAAGGCACGACATGTCCCCGTGCTGGCTATGGGAGTTCGAAA
TGAACCATATCACCATGCCTAGCGTATGGGGCGAGGAGATGGCTTACGCC
TCAAAAAAACAGTCGGAGGGGTGCAAAGACTACTGGAAAAAAATCGGTAA
ACAAACTCTAAAGAACTATTCCTCCTCCTAAATTCAAGTTCCCAAAGGAA
CTGGTTTGGGGAAATGGTGAAACAAACCCGGAAATTTTACCCGGGCCTGA
ATTAAAACCAAAACCCAACTTAAGAAACTATTATCCGATTAATATAGGAT
ATCTTAAACCCCCTATTTGAAGGCACGTACTTC
FMO03220.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:41:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13671-RA | 2278 | CG13671-RA | 53..1169 | 37..1166 | 4785 | 96.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:41:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8300116..8301214 | 37..1144 | 4415 | 95.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:41:22 has no hits.
FMO03220.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:05:11 Download gff for
FMO03220.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13671-RA | 426..1542 | 37..1166 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:26 Download gff for
FMO03220.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13671-RA | 53..1169 | 37..1166 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:35 Download gff for
FMO03220.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13671-RA | 53..1169 | 37..1166 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:35 Download gff for
FMO03220.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8300116..8301232 | 37..1166 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:26 Download gff for
FMO03220.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8293216..8294332 | 37..1166 | 96 | | Plus |
