FMO03225.5prime Sequence
900 bp (808 high quality bases) assembled on 2008-07-09
> FMO03225.5prime
TAACTTCGTATAGCATAATAGAAAAAGTTATCAGTCGACATGTCGTTTTC
CAATGTCCTAATCATGCGACAGCCCGACGAGGGCAAGTGCCACATTTGCA
AGCGTGTCTTCTGTTGCGGCAAATGCCGCCAGAATCATCAGTTCAAAGCG
CACGCCATTGCTGTGCGCGAGCCATTGGGATTGAGGTCTGCCGGCGGCGG
TATCATCGAGCATCGCCATCAAATGGAGTCCGGCGCGACCACCATCTATG
TGTTCTGTCCGATCTGCGAGCGGCGTCCCCTGCTGCTGCGCGAGGAGATG
CACGGCGAGCTGCTGGCCCACATCGAGACCTGCCACCTGCCGCTGCGATG
CCGCAAGTGCCAGCGCAACTACACGCGCGTCGATGACCTGCGGGAGTTCA
GCAAGTGCGTGGACCAGCAGCAGAGCTGCACTGATGTCACCGGCGCCACG
GAGACATCGAAGGCGACGCTAAAGAAGGCAGCGAATAGCACCGCCATTTC
AACGCAAACGTCGCCGTCCGTAACGCCCATTTCACTGATCAACATGCGCT
GGAAGGCCAAGAGCCGTGTCACCCACGAGGAGTTCATCAGCGACAGCGTC
TCCTCCATACGCAACCTGTCGTCGTTCAGCAACAGCTCCATTCGTCGCTC
CATTGGCCAACTGGGCGTGAATCCGTCCGAAACGATGGAGAAGGGCAAGG
TCATACGCTCGACGTCCACACCACTGCACGTGGAGTCCGTGTTCGCCAGC
CCAAGGAGCCGATTACCTTCAATGCTTCCACTGGCGGCCACGTGTCCAGC
ATCTACCACGATGAGCCAAGTCCGACACCCGAATGCAATCCCGTCCAGCA
GCAGCAGTAGCAGCAGCAGCCGTTGCAGCACGCGCCCTGGAAAATGGGCG
FMO03225.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fs(1)Ya-RA | 2235 | CG2707-RA | 59..920 | 40..900 | 4165 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2724441..2725262 | 80..900 | 3910 | 98.7 | Plus |
| X | 23542271 | X | 2724344..2724386 | 40..82 | 215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:40:46 has no hits.
FMO03225.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:06:56 Download gff for
FMO03225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)Ya-RA | 53..920 | 32..900 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:26 Download gff for
FMO03225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)Ya-RA | 53..920 | 32..900 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:09 Download gff for
FMO03225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)Ya-RA | 53..920 | 32..900 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:09 Download gff for
FMO03225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2724443..2725262 | 82..900 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:26 Download gff for
FMO03225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2618476..2619295 | 82..900 | 99 | | Plus |
