FMO03226.5prime Sequence
698 bp (592 high quality bases) assembled on 2008-07-09
> FMO03226.5prime
TTCGTATAGCATAAAAAGGGCCAAGTTATCAGTCGACATGCCCACCTTAA
TAGCGCTGGATGCATCGCTATCGATGCTGCGCCCGGTGCCGGGAAGAAAT
GAGCACACCTACCAGTCGCTGGCCACCAAGGGCATCCAGCATCTGCTGGA
CAATCTCACGGCGGCCGGCAAATTGGAGCACGTTGCTCTGCTCTCCTATT
CGACGACGGCGGAACTGAAGGTGGACTTCACGCGGGACTACGACCAGGTG
CGGCAGGCGGTCAAGAAGGTGGAGCCCGTGGACAAGGCCTGCCTGATGAG
CATGCTCAAGGCGGTGGTGTCCATAATGTCGCCGTGGGGCAACCAGAACA
TCCTGCAGGTGTTTGTCTTTACGGACTGCGGCCTCGGCTTTGGCAACACC
TCGATCACGGGCTTCCTGGAGGCCTACGCCGAAAAGGAGTCGGAGCCGGA
GTTCGGCTTCCTGAAGACTCTGGCCAACTACAACCTGAATTTCATCTGCC
TGGGCCTGCACGGCGATTACTACTTCACCAGGGGATTGGCGGTGTACTAG
CAGCTGCTGGACAAGGTCTCACTGAAGGGCCAGCTCTTCATGACAAAGCC
CGCAAGAGCAGCGATGCAGTCGAGGGAATCCCAATCCCTACCCGAACCCC
AGCCACAAAAGCGAACTGGGCCGCACTACGGACTTCAACTAATTGAAC
FMO03226.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IntS14-RA | 1925 | CG4785-RA | 94..761 | 34..698 | 3190 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1164536..1165081 | 34..579 | 2685 | 99.5 | Plus |
| 2L | 23513712 | 2L | 1165138..1165261 | 578..698 | 440 | 96 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:11:13 has no hits.
FMO03226.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:02:25 Download gff for
FMO03226.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4785-RA | 59..734 | 26..698 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:05:45 Download gff for
FMO03226.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4785-RA | 86..761 | 26..698 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:49 Download gff for
FMO03226.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IntS14-RA | 86..761 | 26..698 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:49 Download gff for
FMO03226.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1164533..1165080 | 34..578 | 98 | -> | Plus |
| 2L | 1165139..1165261 | 579..698 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:05:45 Download gff for
FMO03226.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1164533..1165080 | 34..578 | 98 | -> | Plus |
| arm_2L | 1165139..1165261 | 579..698 | 95 | | Plus |
