FMO03231.5prime Sequence
1225 bp (1060 high quality bases) assembled on 2008-07-09
> FMO03231.5prime
ACTTCGTATAGCATAATAAAACAAAGTTATCAGTCGACATGAGTGGATAT
CGAGGCATTGGCGGTGGGGGCTTCCCCTACCGCAAGCCAGCAAGTTCCGG
CAACAACATGAACGCCGTACCGCCGCCCCCGATGCTGAATGCCCGTGGCT
ATTCTGGTTCCCGCGGAGGATTTGGAGGAGCAAGCCGTGGCGGTGTCACC
GGGAGCACTACATCAACGTCCAAGCACGGCTACTCCACCTTGGACTCCAT
CAGCCAGTACACCAATGCCACCAATCTGGTTGGCAAAAGGAAGCACCACA
CGGACGATGACTATTTCGATGATGACGATGAGCCCCGGGAAAAGGAGATA
GAACAAGCCTATATACCGGCACCAGGATCCCCGGGAGCTCCGCCAACGTC
GGCCAAAAAGCAAGAGGATTCCGATTCGGATGAGGATCCCCTCGAGCAGT
TCATGGCGGGCATCAACCAGCAGGTGGAGAAGGAGAAGCGTCAACAAGCA
CCTAAGCCGCCAACTCAGGCGGTGAGAGGTGACATCGATGACGAGGACGA
TGAGGAGAGCTACTATCGCTACATGAAGGAGAATCCCAATGCTGGACTTC
GCGACGAGGGATCCGATCAGGAAATCGAATACGATGAGGATGGCAATCCC
ATAGCCCCACCGAAGAAAAAGGACATTGATCCTCTGCCGCCCATCTACCA
TTCCGAAATCGAGTACGAACCCTTCGAGAAGAACTTCTACACGCAGCATG
ACGACATAGCCGCCCTGGGATGATGAGCAAGTCCGGGAAATAAGGCGCAC
ACTTGGCGTAAGGTCACTGGTCCATCACCACCCAAACAGTCACGTCCTTC
GGCCATTTCGGCTTTGATGAGCACTCATCAAGGCCGTGAGGAAAGCGGAG
TATACACAGCCCACACCCATCCAGGCACAAGCAGTGCCCACCGCCCTGTC
CGGCAGAGAAAATCATTGGCATAGCCAAACTGGTTTCGGGTAAGACAGCA
CCTTTCATCTGGCGATGCTAATGCATGTGATGGATCAAAAAACAGCTGAA
GCCAGGCGACGACCCTAGAACTTATCCTAGCACCCTTACTGCGAGCTTTC
CCTGCAGATCTACAAGGGGCAGAAAGTTTGCAAGGCTACAACCTGAACGG
TGCTCTGCGTCTACGGCGAGGTCTCAATGGGAACAAGATAGCTCTGGAAA
GGGAAGCGAAAATATATGTGGGCAA
FMO03231.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:41:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6418-RB | 2723 | CG6418-RB | 93..1276 | 39..1213 | 5080 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:41:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10877867..10878945 | 1115..39 | 4725 | 97.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:41:57 has no hits.
FMO03231.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:05:23 Download gff for
FMO03231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6418-RB | 81..1229 | 27..1171 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:40 Download gff for
FMO03231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6418-RB | 83..1231 | 27..1171 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:50 Download gff for
FMO03231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6418-RB | 83..1231 | 27..1171 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:50 Download gff for
FMO03231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10877807..10878949 | 36..1171 | 96 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:40 Download gff for
FMO03231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10870907..10872049 | 36..1171 | 96 | <- | Minus |
