FMO03242.5prime Sequence
824 bp (807 high quality bases) assembled on 2008-07-09
> FMO03242.5prime
TCGTATAGCATACATCAGACGAAGTTATCAGTCGACATGAGCGGCAATAC
ACACGGATTCAGCTGGTTTCCACATTTTCCCGACAAATTCGTATCCTGGG
GCCAGGAAATCCATTTATACGAAGTGCGCCGCAAAGATGATCACAGCCAA
AAAAGTCGCCTGCCTTATATATCCGTGAACTACCTCGCCAACGAGTCGCG
CTATCAATATGCCCGCTGCGTGGCCGCCTCCTACCACAGTGACCAGCCCA
TAATTGCAGTGGGTCTGGCGGATGGCAAAGTCGGGATTTGCAACTTCCGG
GACACCTACGACAGCAGCTGGGAGTACACACCGCGTCAGCAGCGCATGTG
CACCTGCCTCGCCTGGAACGAGCTGGATGCCAATATCCTGGCCATTGGAC
ACGATCGCCATCGAAATGACACCTGCATCACCATCTGGGACATTGAGCGT
GGAGTTCCCAAGGAGACGGCCAACTTCTTCGGCGTCGGCGAGTCGGCCAA
CTCCATTTGCTGGGATCGAAATCATCGCACGGTCATTGCGGGAATGAGCC
AGAAGATGATAAAGCTGTTCGATCTGAGGCAGAGTAACGCCACCCTGTCA
AAGCATTCAAACAAAGACAGTGCAGGGACTTTCCGTATCCCCCCAATGGC
ACTATCTCTGCAGCTATGTGGACTCGGTGATCACTCTGTGGGATCCGCGA
AATATCAAGAGTCCCCTCAGGCAGATTCAGTCCTCGAAAAACCATTTGCA
ATCGCTTGGTGTCCGACCAGGACAAGCCTGCTTTCCTCGCTGCACGCGAT
TCCTCCTACCATCACTCCTCTACG
FMO03242.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:45:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mio-RA | 2956 | CG7074-RA | 138..924 | 37..824 | 3765 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:45:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2217830..2218081 | 329..580 | 1260 | 100 | Plus |
2L | 23513712 | 2L | 2218174..2218403 | 581..809 | 930 | 96.5 | Plus |
2L | 23513712 | 2L | 2217598..2217771 | 155..328 | 870 | 100 | Plus |
2L | 23513712 | 2L | 2217427..2217546 | 37..156 | 585 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:45:33 has no hits.
FMO03242.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:02:35 Download gff for
FMO03242.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mio-RA | 55..851 | 27..824 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:55 Download gff for
FMO03242.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mio-RA | 128..924 | 27..824 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:25:05 Download gff for
FMO03242.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mio-RA | 128..924 | 27..824 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:25:05 Download gff for
FMO03242.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2217417..2217544 | 27..154 | 96 | -> | Plus |
2L | 2217598..2217771 | 155..328 | 100 | -> | Plus |
2L | 2217830..2218081 | 329..580 | 100 | -> | Plus |
2L | 2218174..2218416 | 581..824 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:55 Download gff for
FMO03242.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2217417..2217544 | 27..154 | 96 | -> | Plus |
arm_2L | 2217598..2217771 | 155..328 | 100 | -> | Plus |
arm_2L | 2217830..2218081 | 329..580 | 100 | -> | Plus |
arm_2L | 2218174..2218416 | 581..824 | 97 | | Plus |