FMO03243.5prime Sequence
865 bp (681 high quality bases) assembled on 2008-07-09
> FMO03243.5prime
TTCGTATAGCATACATAAAAAAAAGTTATCAGTCGACATGGGCGGCCACC
ACAAGAATAACCTGCGTGCGGAGAAGGCCAAAGTGAAGCTGAAGGGCGCC
AAGCTGCCCAAGGGCCTGAACGTGACCAAGACGGACTTCAAGGTGCGCAA
AATTGAGATTCGGGAGCAGCTGAAGGAGTCCTCCTACTCGGAAACGGGCC
AGCGACAGTTCAATCTCAAGGAGACACTGTCCCGTCTGAAGCATCATAGT
GTCAAGTTCCGCACTGATGCACAGCGCAATGTGCGCGACTCCCTGAAGTC
CGGAAATGCGGACCATTTAATTGGTCATCTGAACGAGCTGTTCCAAGGAA
TTGCGGCCGGAGCTTTGGACATGGAGGGGTCGGCGCGAAAGGAATCATTC
AAGACCCTTGATGTTCTGCTAGAGGCACTGCAGCCACAAGCAGTGGCGCC
CTTCTTCCATGTCATAGCCACCTATTTGCGTTGCGCCATGACTCACGTGC
TGCCCGCCATCCAGGAGGACTCGCTGCTCATGCTCGACGTCCTACTGTTG
CGCGTACCACCGGCTTTCTTGGCCGAGCGGAGTGCCAGCACCATAATTGG
CAACTTCATCTACATGATCTCCCGCGCCCGCCACGACAACGAGCGTTCGA
ATCGAACGTTTGACATTGAACCTGAGTCAGGGCAACAAACAACTGTGAAG
TGGCGCACCAAGGTGCTTATCCCGTCTGCACCAGATCCTCAGCACGCTAG
TCACCCTCAAAACGCCAAAGTCACCCGCTGCCCGTGTGGTTCACTTCAAG
GAGATGCGTCCGCAAATTACAATGTGATGTGTCCCGAGCGCCATGACAAT
CGCATCTGCATGCCA
FMO03243.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:11:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1575-RB | 2053 | CG1575-RB | 47..875 | 38..865 | 3820 | 97.8 | Plus |
| CG1575-RA | 2119 | CG1575-RA | 113..941 | 38..865 | 3820 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:11:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8117124..8117952 | 38..865 | 3695 | 97.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:11:47 has no hits.
FMO03243.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:05:26 Download gff for
FMO03243.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1575-RA | 62..889 | 38..864 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:35 Download gff for
FMO03243.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1575-RA | 113..940 | 38..864 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:38 Download gff for
FMO03243.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1575-RA | 113..940 | 38..864 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:38 Download gff for
FMO03243.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8117125..8117951 | 39..864 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:35 Download gff for
FMO03243.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8011158..8011984 | 39..864 | 97 | | Plus |
