FMO03255.5prime Sequence
458 bp (457 high quality bases) assembled on 2008-07-09
> FMO03255.5prime
TAGCATACATAAAAAGAAGTTATCAGTCGACATGCTGCAAAACAGTTTCC
CATTGGCCCAGAGCCTTCGAAACGGCTTCTACAGAAACGCCTGGCGAGCG
TTCAGCTCCCACGGACCCCGGCAGCCTCTGGTTTCGCCGGAGCGGCGCTT
GGAAAAGGCGCATCCAACCTTCACGGAAAGGAGTCAGTTGAAGTACGCCC
GGAGGCTGGTGGTCAAGTTGGGCAGTGCAGTCATTACTCGAGAGGACAAC
CATGGACTAGCCCTCGGCCGTCTGGCCTCTATTGTGGAGCAGGTTGCCGA
GTGCCATTTGGAAGGACGTGAAGTGATGATGGTCACCAGCGGAGCGGTGG
CCTTTGGAAAGCAGAAGCTCGCCCAGGAGCTGCTCATGTCGCTGTCCATG
CGCGAGACACTAAACCCAAAAGATAGCAAAGAGTTTGACGGCGCTACGCT
GGAACCGC
FMO03255.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7470-RB | 4686 | CG7470-RB | 146..572 | 32..458 | 2075 | 99.1 | Plus |
CG7470-RA | 2868 | CG7470-RA | 146..572 | 32..458 | 2075 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21976295..21976461 | 128..294 | 835 | 100 | Plus |
3L | 28110227 | 3L | 21976582..21976724 | 291..433 | 715 | 100 | Plus |
3L | 28110227 | 3L | 21972147..21972241 | 32..126 | 430 | 96.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:41:05 has no hits.
FMO03255.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:07:06 Download gff for
FMO03255.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7470-RA | 147..573 | 32..458 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:35 Download gff for
FMO03255.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7470-RA | 146..572 | 32..458 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:15 Download gff for
FMO03255.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7470-RA | 146..572 | 32..458 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:15 Download gff for
FMO03255.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21972147..21972242 | 32..127 | 95 | -> | Plus |
3L | 21976295..21976459 | 128..292 | 100 | -> | Plus |
3L | 21976584..21976724 | 293..433 | 100 | -> | Plus |
3L | 21976786..21976810 | 434..458 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:35 Download gff for
FMO03255.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21965247..21965342 | 32..127 | 95 | -> | Plus |
arm_3L | 21969395..21969559 | 128..292 | 100 | -> | Plus |
arm_3L | 21969684..21969824 | 293..433 | 100 | -> | Plus |
arm_3L | 21969886..21969910 | 434..458 | 100 | | Plus |