FMO03256.5prime Sequence
1248 bp (964 high quality bases) assembled on 2008-07-09
> FMO03256.5prime
TATAGCATACATAAAACGAAGTTATCAGTCGACATGATTCGGCTACTCAA
GACCCTTCTTTATTGCCTGCTCCTCATCTCCCCTGCTGATGTGCTGGGCC
GGCTTAATGCCAGAAAGTCGGCGAACGAGGCGAGTCTCTATAGCGATACA
GACAATGTGATTATGTTGGACATCGAATCGCTGAGGCCAGCTCTAAACTT
GAAGAACAGCAAGCTGGTTCAGTTCCTCAACAGCTTCTGCGGTGACTGTC
ATCGCTTCGCACCGGTCTTCAAGACCCTTTCCCGCGACCTCTACAAGTGG
CGAAGAATTCTCCGGATCTATGCCGTAGATTGTGCCCAGGAGAGAAATGC
TCAACTCTGCAGGGAATTCAATATCCGCCAGACGCCATCATTGCGATTCT
TTGGTCCCGACATGAGGAAGAACGATGATGTTCTTGGAGCGGTAATCCCA
GGCCAAGATCCCGAGTTCATTAGCTCAACACTGGCCGAATTGGTATCCCA
AAATGACTATGGACCCGGCCAGCCAAACTTTCGTCCCCTAAAAGCAACAG
ACTATGAAATTTTCCAAGATCAAGATGGGGAAACTCCGATACAATTTGTG
GCTCTTGTCCTTCAGCCAAAAAATTCAAAGATCGGCAGGGACACGCTGCT
AGAACTGCTGCCATTCAAAGAGCTATCGGTGAGGATAATCGAAGATTCTC
AGATATTTAACGAATTTGGACTGGGTCCCGACGACCAAAAACTGGCTATA
GTTGATAGAAATGGAACCGCCCAGTATCTTACACCATCTTCGGACTCCAG
TGAAGCGTATGCCAGCACTATTGGGAGACTTCCTTAAGAACCGCAATATT
CAGCCCAGATCCACCACTACCCATCGCTGTACCCCAAACTTACTGAGTTT
CTGGATCACCAAAATCAAGCGATACTTACTAAAAGTGCTTACGCCACCAC
TGCAGGTCTATCGTGCCGACCTGGAGCAGGCAATCAAAAACTGCTGCCCA
TTGAGCTCGTAATGGTTCCTTTTGGAAGGTAATAGCTTGAATGCTCCTTA
AATAATTATTAAAAATTTTCCGAATCCTTGAATCTGTTGAACAGGAACGA
AGCTATGCCTACTGAACCTGGACCACTCGTTGGCCTCTGAAGCCAAATAT
AAAGGGAAGCTAACGTGGGTATTGCTTGATTCGCTTTGGAAATGGCCCAA
GGTGGTTTATAAAGGCACAGGCCAAATTACTTGATGCTCGTGCACCTT
FMO03256.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:52:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17843-RA | 1800 | CG17843-RA | 43..1219 | 34..1209 | 4895 | 95.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:52:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21913789..21914819 | 34..1062 | 4575 | 98 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:52:52 has no hits.
FMO03256.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:07:07 Download gff for
FMO03256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17843-RA | 35..1091 | 28..1084 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:42 Download gff for
FMO03256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17843-RA | 37..1093 | 28..1084 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:02 Download gff for
FMO03256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17843-RA | 37..1093 | 28..1084 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:02 Download gff for
FMO03256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21913780..21914839 | 27..1084 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:42 Download gff for
FMO03256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17739502..17740561 | 27..1084 | 97 | == | Plus |
