FMO03258.5prime Sequence
1243 bp (1069 high quality bases) assembled on 2008-07-09
> FMO03258.5prime
TCGTATAGCATACATTAAACGAAGTTATCAGTCGACATGTTTCATGAATC
ACTGAAGCTGATCTCCCTGATGCTGCTGTGGGTCATTGTGGCTGCGGTTC
TGACGGATTGCGAGGCCAGGAGCCTTGTGGACAGGTCCGAAAATTCCGAT
AGCAATGGTAGCTCGACCAATAGATCCGCGGCAGAGTACCAACTGCAGGA
ATACGCGGAATTCATGAAATCCTATATGAACCAAAGTGTAGAGCCCTGCG
AGAATTTCTACGAGTATGCCTGTGGAAATTATCGGAACGTAAAGCCGGAT
CGGTACTCACCGGGCAGTAGAAGCAACCTGGGCGACGTGACTTACACACT
GATCGACATCACGGAGCAACTGCTGGGCAGAATGGATCTGGCGGAGGCTC
TAAACGTATCCAGCGAACTGGCGGTGGCCCAGCGATTCTACAACGCTTGT
CTGGGAGCAAATCTCCATCCTTTCAATGCGGCGGATCCCGCTTACTTGAG
TCTAATTCGATCGATTGGAGGATTTCCCGCTGTGGATGGAGACGCCTGGA
AAGCCTCAAACTTTAACTGGATCAACATGAGTGCTCATCTGGCCAACTAT
GGCGCCAACGGTCTGATCCGCGAAACTCTCCAGTTAAGGTATCCCTTTGA
GCCCTACACCAAACTGCCCGAACTGGGCTTCGATCACATCATCGTACATG
AGGAAAACATTTCCAGAAATACCACACGCGCCTTTCGCCTGAACGAAGAG
CGAATGCACGGATATCTGAGGGCGTTCGGCTTGCCGGAGGACAGGATTAG
GGAGGCCATCGCTGGGGTCTTTGCCTTCTGGCGGGACGCACTCGAGATCC
CGCCCCAGTGCGAAGTGTTTGATCCCTACGAATTAAGCGAGTGTTTCCCC
AATCGGAGTACTACTATAACATCTCGTGGAGTGGACTCCACTCCACTAAC
AAATTATTCTGCGACTTTACTACGTTGAACTGGACAAGTATGCGCCGACA
TCGCAGGGCTGTGGCCAACTACCTGGCATGAAGCTGCTCTATAGATTCGA
TCCCAAACTGAAGGCGCCCAGGTACCAAGGACTACTGTTCGGGTTACGCT
TTATCAATCCATGCGTTCTGTTCACAACTCCTAATGCCTAACACTTCATG
GAAGCGAAAAGCCTGGAAGTTCGGATTGGTCGCATACTCGCAAAGATCGC
CAAAAGCGGCCCCTGTGAAGAAGATGTCCATTATGTTCGCCTG
FMO03258.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8358-RA | 2197 | CG8358-RA | 30..1171 | 37..1167 | 5250 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9675552..9676636 | 37..1115 | 5035 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:18:32 has no hits.
FMO03258.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:07:00 Download gff for
FMO03258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8358-RA | 30..1135 | 37..1133 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:31 Download gff for
FMO03258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8358-RA | 30..1135 | 37..1133 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:36 Download gff for
FMO03258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8358-RA | 30..1135 | 37..1133 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:36 Download gff for
FMO03258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9675552..9676654 | 37..1130 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:31 Download gff for
FMO03258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5501274..5502376 | 37..1130 | 98 | <- | Plus |
