FMO03259.5prime Sequence
1274 bp (911 high quality bases) assembled on 2008-07-09
> FMO03259.5prime
TTCGTATAGCATACATTAAACGAAGTTATCAGTCGACATGATCGATATTT
TGTCGCTGCCGCGGCGAAATAAGGTGTCCGGAAACCCGGCCCTGCTAAAG
ATGATCTCCTACAAGACTGGACTACCCATCAACAGTCTACCCGGATGGGA
GCTGATCCCTCTTAATTGCAAGCTGCCAATGCTCAAATGTCCCGGCAATC
AGGTCATATTCTCCAAGAACAAGATCGGACAGGACTTCAAGAGCGGTAAA
CAGGAGTTTGAGTGTTCCGTTACCGAACACATCCCGGAGTACAATCCGCT
ACACGACTCCAACCTAAAGACGTTCTACTCCAATGAGCGTAATCTGAAGC
GGTTGAGGGAAAACGGTGAGATAACGCAGGACAACGATGTAATATGCAAT
CTGAAGGACTTCAATCAGCATCGCCAGGAGCTGCACAAATCGCAGTTGTA
CTACATTTTGCAGGCATACAAGCGGCGCGAGTCGGAGCAATATGATCGAA
TGCTGATCGCCAACGCGGAGTCCATCACAAAAAAGGATCACCAGAATCTC
GCAGCCCGTCACCAGTGCACTGAGGAGGTTCTTGCCAGAAAGAAACTACA
GGAGCAGGAACGCCACGAAAGAAAGGTCCATCTGCTGAATATCACATATG
AGAAGTTTAAGCGCTTAGAGAACCTGGCCACCATGCAGAATATGTTGCTG
GAGCACCGCAAGATGCTGACAAACATGCGTGTAGCTGCCCCACATAAGCA
TGTGCCAGGATTTGATGAGAAAGCTATTGATCAAACAGAAGAAGCTCTTC
CAGTTCAAAAGGATCGGTTCAACAAAAAACATGCGAATCCCTGAGGAAAC
ACCGGCTGGTAAAGAACCTGAGCACCAGATTCAGTCGTGGAGGAAGCGAC
TTGATGAACGGAATTGCTAATCAGCGTAAGGATCGAATACCTCCCTGCAG
GAGGTTGAAAAAAGAGCGATAAGGCCGTTATATACCGGCACAAGGCTCAT
TAACAAAGAAAAAGTGCCAACGGATTAGGGACAGATTAAGAAGAGCTCCA
AAAGGCCCTCCCTTGCCTCGTCAACTCCTAAAAGAAAGCCGCCGCCATGA
AAGAAGAAGTCCCACCATCAAGGAACGCAAGCCAACTCGTCCCGGCGATG
AGAATCCAGCCCCCTTGGAGGGCGTGTTAGAACGTGGTACTTTGTCGCCC
TGAATGCCACCCTTCCAGTGGAGGTCATAAACGCTCCTCTGCTCTCCCCA
CCACACAAGACAACAACACCCTAC
FMO03259.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3345-RA | 2417 | CG3345-RA | 105..1258 | 38..1207 | 4640 | 94.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 269458..270218 | 236..1002 | 3225 | 97.7 | Plus |
| 2L | 23513712 | 2L | 269192..269389 | 38..235 | 990 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:41:43 has no hits.
FMO03259.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2010-07-30 09:27:30 Download gff for
FMO03259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3345-RA | 105..1100 | 38..1040 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:01 Download gff for
FMO03259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3345-RA | 105..1100 | 38..1040 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:37 Download gff for
FMO03259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3345-RA | 105..1100 | 38..1040 | 97 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:37 Download gff for
FMO03259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 269192..269389 | 38..235 | 100 | -> | Plus |
| 2L | 269458..270261 | 236..1045 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:01 Download gff for
FMO03259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 269192..269389 | 38..235 | 100 | -> | Plus |
| arm_2L | 269458..270261 | 236..1045 | 96 | -> | Plus |
