FMO03266.5prime Sequence
1015 bp (261 high quality bases) assembled on 2008-07-09
> FMO03266.5prime
TCGTATAGCATATTAAAACGAAGTTATCAGTCGACATGGGCAATTTCGAC
GGCGATTCTGGAACGGTTTTCAAGCAAAGCTATGCGACGACCAACGGAAA
CGGAAAGGTGCCGAATGGCAATGGGGCGGCAGATCTCAGTGCCCCGGAAA
AACAGGAACTTCTCCGGAAGTTCTCGGCACCCGCGTACACTGAAATTCGC
ACGCGACGCTGCCAGCCGAAGCCCGCAAACGACGCCCAGAGTCCCAGCTC
GATCAACTACCATCCGGAAAAGAAGTCGATCCCCAATGGGCATGCCTCCA
TTCTGGATCAGGAGTCCAAGCCCAACCAGGCAAAGGGGAAACTTTCGCCG
GAGCTGGAGCACTTCCAGAAAACCTCCTTTGAGGAGGTGCCTTTGCACAC
GGCCTGCCTTACGTATTTGGGATTCTATCTACTGATGATCCTGGGCTACA
TCATCCAGTTGCTCTTCGTGCCCAAAGTGGCCACCGAGAAGGGACGGGAT
GGCTATGTAGCCCTCTACGATGCCTTCGAAAAGCTTCTACTCGAGGTACG
TTTACAAGGAGAATCAAGGATTGCTGGAACCGACCCATCTGCAGTGTTCC
GGGAGACGAACTCGCTCTAAAGGATCGCGTAACCGATGATTATGGATGGA
GTTTCAAGTTCACTGGAACGGAGACGCGTTGCTTAATCTGGGATCCTACA
ATTACCTGGGAGTTGCCGCCGCTACTGGACAGTGTGCTGATGATTCAGAG
GAAAGTGCTCGGAGCTCTGAACTGGCGTACTGCAGCTCCCGTTGTGAGCT
TGGAGACAACGAGCAACTGCAAGAGCTGGAGGCTCTAACTGGCCGATACT
TTGGTGTGGAGGATGCATTGTCTTGGAATGGGTTTCGCCACAATGGCGTG
AAACTTCCCTCACTGCTTGGACCCAACAGGTCTTGTAGATTATGAAGAAA
AGAATTCACGCCCTCATCCATTTTGGGACTTGCGTTTGACCGGGACCACT
AGCAAGACCTTTAGC
FMO03266.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lace-RB | 2564 | CG4162-RB | 95..1070 | 36..1013 | 4180 | 95.8 | Plus |
| lace-RA | 2991 | CG4162-RA | 95..1070 | 36..1013 | 4180 | 95.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15502114..15502888 | 237..1013 | 2925 | 94.6 | Plus |
| 2L | 23513712 | 2L | 15499221..15499424 | 36..239 | 990 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:13:24 has no hits.
FMO03266.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:07:10 Download gff for
FMO03266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lace-RA | 112..1080 | 36..1006 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:05 Download gff for
FMO03266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lace-RA | 95..1063 | 36..1006 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:28 Download gff for
FMO03266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lace-RA | 95..1063 | 36..1006 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:28 Download gff for
FMO03266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15499221..15499424 | 36..239 | 99 | -> | Plus |
| 2L | 15502117..15502819 | 240..943 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:05 Download gff for
FMO03266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15499221..15499424 | 36..239 | 99 | -> | Plus |
| arm_2L | 15502117..15502819 | 240..943 | 96 | -> | Plus |
