FMO03267.5prime Sequence
894 bp (892 high quality bases) assembled on 2008-07-09
> FMO03267.5prime
AGCATAATAAAAAAAAGTTATCAGTCGACATGACGAAAGTAACGCCGAAA
GGGCGCCCGAAGGCTAAGACGCCGTACAAACGCTACTTCGACGGCCAAAA
GGACACAGAAACGGGCGACGGCGATCTAAAACATGTAAAAGTGTTCAGCA
AAAACCGACAGAATTTCACTGGCGATTTTATCAGTATGATTAATAAAACG
AAGAAGCCGCGTCCCCAAAAGGCTCCCGCCAAACCCACAAAGGAGGAGCT
GGAAGCTAGGCCCAAGAAGAACCCGATTCCCAAGGAGATCCTCGACAAGT
ACTCACGTGGCGAGCAAGTGCAGCCGAAAGGTGTGAAAACGCGGCACTTC
AAGGAGCAGCAGACGCGCAAGGAGGTCTACCTCGAATACGCCACCGAGCA
GGCGGCCCGCACAGAGCTCCTACTCCAGGAAACCGCTGGGCAGCTACAGG
CAGATGAGGGCGAGACCACCGCCGAATTTAGACAGTCCCAAATTGCCGAG
AATGTGGATATCCAGTCATCGGCCAAGCACTTCAACCTGAACATGGAATT
CGGTCCTTACCGAATGCGCTACACCAAGAACGGCAGGCATTTGCTGCTCG
GCGGCAAACGCGGTCATGTGGCCGCCTTCGATTGGGTGACCAAGCGTCTG
CACTGCGAATTCAATGCGATGGAGAGCGTCGAGGATGTTCAGTGGCTGCA
TGTGCCCACCATGTACGCGGTGGCCCAGAAGAGCTGGGTCTATTTCTACG
ACAAAAAGGGCACCGAACTGCATTGCATCAAGCGGGCTGATTCGGGTCAT
CGCCCTGGACTTTCCTGCCCTACCACTTCCTCCTGGCCGCGGCAACAGTG
CGGGCTATGCTTTCTGGCTTGGACGTCTTCCATTGGCGAGCTGG
FMO03267.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:50:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2260-RA | 2004 | CG2260-RA | 117..978 | 30..894 | 4130 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:50:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8120170..8121031 | 894..30 | 3990 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:50:53 has no hits.
FMO03267.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2010-07-30 09:27:34 Download gff for
FMO03267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2260-RA | 83..951 | 22..894 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:36 Download gff for
FMO03267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2260-RA | 110..978 | 22..894 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:44 Download gff for
FMO03267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2260-RA | 110..978 | 22..894 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:44 Download gff for
FMO03267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8120170..8121039 | 20..894 | 98 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:36 Download gff for
FMO03267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8014203..8015072 | 20..894 | 98 | -> | Minus |
