FMO03269.5prime Sequence
1273 bp (952 high quality bases) assembled on 2008-07-09
> FMO03269.5prime
TTCGTATAGCATACATAAAACGAAGTTATCAGTCGACATGGCTGTTGCAA
AGAAGGAAAAATTTGAGGCAAAAAAGAAAAGCCCTGAAAAGGGAAAACAG
CAGAAAGCCAAAGTTGTTCCTGTCACACCGCCACCAAATGTAAAACAACG
AACTGTGGTCACTCCTTGGCGAGACACGCTGGAATTTAATACAACGTACA
AATGGTTGTTTGGCAAGTCCAACACACCAGCCACATGGCGTCAAGCGCTC
AGTAAAATCCGCATTTGGTGTCTGCGAAGAGGAAGTCTCTGCCCGGCAGC
GGTTTTGGCCACATCGGTGCTTGTTCAGGCGCACTTGGAGGACCAGGAGG
GCAGCGCCAAAATACAGGACACCTATGCCAGTGCCTTTACACGATTCTAC
AACTTTATGTCCTCCATTATCCAGGGACACAACATGTCCAGCATGTATGA
AACGGCCAAGGAACTGGGCCTCCAGTCGTTCATCGTTGATCTGCGCCACT
TGTGCGCCCATGGACAGGAGCTGCCGCCTGTGGAGGTGCTGAGAAACACC
TCGAATCATTGTCTGGAGTGGCTGCGCACCTACTACTGGTTGCCACACAT
GGAAACCATGTCCAATTTGGATGCTGGCAAACTGCATCGCAAGGACAAGC
TTAAGTTTGAAAAGGCTGTGACAGATCTTCTGGAGATCTACGATCTAACC
CTGGGAGTGCCATATCAAGGGGGCTGAGAAACTAAAGGCCATTTAGCAAG
CTAAAATCCAGTGGTGAATTCAATAAGATACGAGTCTACTCCTCCAGCAA
GAAGGCGAAGACATCGAAAGAAATTCTGAGTTGCTGTGTTAGGTGATCTA
GTGCGTTGGTCAAAAAGGAGTCATCATCGATGAAGGATCTGCTGGACATA
TATACAAAATGCCTGCTTTAAAATGAATTACTTCCTTGGCGTTGGCTTGG
AAAATCGACGACAACGAGGATGTAATCATTGCAGCCACACAGGGACTTCT
TTCCGTCTATTGGCCGGTGCAGGAATATAATCGAGAAGTTTTTTTGGGCC
CTAGTTCAACTGAGTGAAAAACAAAAACAGAGTCGAGCAAAGGCTGTTCT
GGAAGCCAGCTACTGGGCAAGAAAATGTTTGAAACATTGGGGAAGGCTGT
TTTCCGAATAGAAGCGCAGTCAAAGCCGAACACTGGTATTTGAACGATAA
CTAAAAAGCGAACTTGGCCCCTTAAACCGGATATAAAAATTCTCAGAGAC
AATTGGCGCAGACTCGCTGTGAC
FMO03269.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32075-RB | 1751 | CG32075-RB | 77..1263 | 37..1233 | 5105 | 96.4 | Plus |
| CG32075-RA | 1955 | CG32075-RA | 281..1467 | 37..1233 | 5105 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11063506..11064461 | 1143..178 | 3970 | 97.1 | Minus |
| 3L | 28110227 | 3L | 11064520..11064661 | 178..37 | 710 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:49:24 has no hits.
FMO03269.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2010-07-30 09:27:35 Download gff for
FMO03269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32075-RA | 277..1349 | 37..1120 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:09 Download gff for
FMO03269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32075-RA | 281..1353 | 37..1120 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:02 Download gff for
FMO03269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32075-RA | 281..1353 | 37..1120 | 97 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:02 Download gff for
FMO03269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11063523..11064461 | 178..1126 | 97 | <- | Minus |
| 3L | 11064521..11064671 | 34..177 | 94 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:09 Download gff for
FMO03269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11056623..11057561 | 178..1126 | 97 | <- | Minus |
| arm_3L | 11057621..11057771 | 34..177 | 94 | <- | Minus |
