Clone FMO03276 Report

Search the DGRC for FMO03276

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:32
Well:76
Vector:pMK33-CFH-BD
Associated Gene/Transcriptect-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03276.5prime Sequence

216 bp (69 high quality bases) assembled on 2008-07-09

> FMO03276.5prime
ACTTCAAAAGGAAGTTATCAATCGAATGAAGTTCGTGATTTTGCTGTGCG
TGCTGAGCGCGTTGCTGCTGCAAATTGAAGCGTCGCCCCTCCAGCGGCTT
TCGAGAAGCGAGCGGGCTGTTTCCCGCCAACTGACGGTCAACAATGAGGT
GGCTCCGGCGGTAGCTCCTGCCAGCGATGATGACGATGATGACCACCATG
AGGACGACGATGATGA

FMO03276.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:10:00
Subject Length Description Subject Range Query Range Score Percent Strand
ect-RF 2070 CG6611-RF 134..324 26..216 910 98.4 Plus
ect-RE 1947 CG6611-RE 134..324 26..216 910 98.4 Plus
ect-RD 2426 CG6611-RD 191..381 26..216 910 98.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:09:58
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 10196243..10196433 216..26 910 98.4 Minus
Blast to na_te.dros performed 2014-11-28 19:09:59
Subject Length Description Subject Range Query Range Score Percent Strand
G6 2042 G6 G6_DM 2042bp 1378..1415 196..159 99 79.5 Minus

FMO03276.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:05:39 Download gff for FMO03276.5prime
Subject Subject Range Query Range Percent Splice Strand
ect-RC 184..377 19..215 96   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:06 Download gff for FMO03276.5prime
Subject Subject Range Query Range Percent Splice Strand
ect-RD 187..380 19..215 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:46 Download gff for FMO03276.5prime
Subject Subject Range Query Range Percent Splice Strand
ect-RD 187..380 19..215 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:49:46 Download gff for FMO03276.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 10196244..10196437 19..215 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:06 Download gff for FMO03276.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 10189344..10189537 19..215 96   Minus