FMO03277.5prime Sequence
377 bp (195 high quality bases) assembled on 2008-07-09
> FMO03277.5prime
TAGCATACCTCAAACGAAGTTATCAGTCGACATGTCCAAGCGTCGAATCG
CATTGGGGGAGACCTACGGCAGCAAGGCGAAGAAGGACCCGGAGGCGTCC
TCCTCGTCGGCGGCAGCCGCTGCCGGCACAGTGGCTCAAATCCTGGGCGG
ATTCGTGCCCAACAAGCAACCGCCCACGATGAACCCGCTGACCAACACGC
CGTACTCACAACGGTACCAGAATCTCTACAAGAAGCGCATTGCGCTGCCC
GTGTTCGAGTACCAGGCGGACTTTATGCGGCTGCTCAGCCTGCACCAGTG
TATTGTGCTGGTGGGCGAGACAGGCTCCGGCAAGACGACCCAGATCCCGC
ATTGGTGCTTGGACTTCGCAGTATCCA
FMO03277.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11107-RB | 2610 | CG11107-RB | 204..550 | 31..377 | 1660 | 98.6 | Plus |
CG11107-RA | 2747 | CG11107-RA | 341..687 | 31..377 | 1660 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7387635..7387927 | 85..377 | 1420 | 99 | Plus |
2R | 25286936 | 2R | 7387527..7387581 | 31..85 | 245 | 96.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:38:14 has no hits.
FMO03277.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:02:41 Download gff for
FMO03277.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11107-RA | 314..659 | 31..376 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:44 Download gff for
FMO03277.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11107-RA | 341..686 | 31..376 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:55 Download gff for
FMO03277.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11107-RA | 341..686 | 31..376 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:55 Download gff for
FMO03277.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7387527..7387580 | 31..84 | 96 | -> | Plus |
2R | 7387635..7387926 | 85..376 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:44 Download gff for
FMO03277.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3275032..3275085 | 31..84 | 96 | -> | Plus |
arm_2R | 3275140..3275431 | 85..376 | 98 | | Plus |