FMO03285.5prime Sequence
264 bp (222 high quality bases) assembled on 2008-07-09
> FMO03285.5prime
TTCGTATACCATAAAAAAAGAGGGGCCCTATCAGTCGACATGAAGTTCCT
GGGCATCGCCCTAATGCGTTGCCTTTTTGGCCCTTCAAGCTAAGTCAGCC
CAAGCTGTTTGTGGCTATGAGTCTTGCCATGAATCCCAAATCAAACATGA
TCAACATACACTTGGTGCCCCACTCCCACGACGATGTGGGCTGGCTGAAT
ACCGTTGATCAGTACTACTATGGCCACAAGAATAACATTCAGCACGCTGG
AGTGCATTAATTCA
FMO03285.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9466-RB | 3074 | CG9466-RB | 68..282 | 40..256 | 945 | 96.3 | Plus |
CG9466-RA | 3063 | CG9466-RA | 68..282 | 40..256 | 945 | 96.3 | Plus |
CG9468-RA | 3160 | CG9468-RA | 172..278 | 144..250 | 355 | 88.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8775920..8776055 | 256..120 | 575 | 96.4 | Minus |
2L | 23513712 | 2L | 8780729..8780835 | 250..144 | 355 | 88.8 | Minus |
2L | 23513712 | 2L | 8776116..8776196 | 121..40 | 330 | 96.3 | Minus |
2L | 23513712 | 2L | 8768400..8768506 | 253..147 | 250 | 82.2 | Minus |
2L | 23513712 | 2L | 8772079..8772176 | 241..144 | 235 | 82.7 | Minus |
2L | 23513712 | 2L | 10458461..10458549 | 136..224 | 220 | 83.1 | Plus |
2L | 23513712 | 2L | 10455716..10455826 | 253..143 | 195 | 78.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:49:58 has no hits.
FMO03285.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2010-07-30 09:27:37 Download gff for
FMO03285.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9466-RA | 62..287 | 32..263 | 93 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:18 Download gff for
FMO03285.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9466-RA | 64..289 | 32..263 | 93 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:19 Download gff for
FMO03285.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9466-RA | 64..289 | 32..263 | 93 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:19 Download gff for
FMO03285.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8775913..8776053 | 122..263 | 94 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:18 Download gff for
FMO03285.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8775913..8776053 | 122..263 | 94 | <- | Minus |