FMO03286.5prime Sequence
784 bp (784 high quality bases) assembled on 2008-07-09
> FMO03286.5prime
GTATAGCATAAAAAAACGAAGTTATCAGTCGACATGGACGAATCCTCGAG
AAACCTCATGGAGGACTGCTTCCTACGCAGTCCCAGCGACATCCGTACCA
CCAACGTGCCCGCGGCGCCTAAATCGCAGGCGGCTGACAACAAGTCTCGG
AAAACGGAGCTCCACGTCCTTCGGCTCAACGATGAATCCCGCCAGATGAC
CATGGACACGCTGCGCCAAATCCACGGCCCGGAATTCCAGCTGGACGACA
TCAGCAAGTACAAGGATCGTGGACGCGGAGGTCATGGCGTGAAGCACTCC
TACTGGCAGGATCGCGGCACCCTGGTGGTGCAGAGTGTCCAGGGCGTGAG
CTCAACGCGTGGCAACGACAGTGATGGTGATCGCCTGCGCCGATATGCCT
TGGCCAAACTGGAGAACTACGGATTTCAGGCTGTCCACTGCCTTGAAGCT
TATGAGCACTGCTCCGGCGACACGGAAGCCGCTCTACTGCTGCTCTACCG
TCGCTATATGAGAATTCCCGATGAGGAGCAACTGACTCTCGAGCCACCCA
GCGAGCAAGAAATACTGGACATGCGCGCCGACGAGAAGGAGGCCCTGGAG
TCCATCTTCGATAAGGCGTACGAGGAGCGCGAGGCGAATCGCGTGTGGAA
CCTAAAGTTTCGCATCGACCATCTGCTGGCCCACAGTCCGTCGGAGGTGC
GAAAGGCCAGGGAGGCGGTCCTGGCCGCCCGCTGCTGCTGCTGCCCAGGC
GGCGCTCGAACAAAAAGAAAAAGCCCTCCTCTAC
FMO03286.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1582-RB | 4184 | CG1582-RB | 45..800 | 26..784 | 3645 | 98.9 | Plus |
| CG1582-RA | 4036 | CG1582-RA | 104..859 | 26..784 | 3645 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10898392..10899063 | 775..102 | 3255 | 99.6 | Minus |
| X | 23542271 | X | 10899124..10899199 | 101..26 | 320 | 94.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:43:09 has no hits.
FMO03286.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:07:17 Download gff for
FMO03286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1582-RA | 100..859 | 22..784 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:58 Download gff for
FMO03286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1582-RA | 100..859 | 22..784 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:23 Download gff for
FMO03286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1582-RA | 100..859 | 22..784 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:23 Download gff for
FMO03286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10898384..10899063 | 102..784 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:58 Download gff for
FMO03286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10792417..10793096 | 102..784 | 99 | <- | Minus |
