FMO03293.5prime Sequence
1255 bp (981 high quality bases) assembled on 2008-07-09
> FMO03293.5prime
TTCGTATAGCATACATAAAACAAAGTTATCAGTCGACATGCAGCGCGATA
GGGACTCATCCGGCTCCAACGCCCGCAAGGGCAACCGCCCACCGGGTCTC
AGGGGCAAGGTGATCGGTTTGTACTATCGCAATCTTGCCCGGCAGCAAAA
GAAGGACAGAGGCGAGAATGCGGAATCAAAGGAGCCGCAAATCCGCTTGG
GCTGCAATGTCAGTGCTCCCAGTGGAGTGCTTGAGCGTGTGAAGGAGTTA
ATGGAGGACTACAGCCGGGCACCGTCCAGACAAAATGTGGATGACAAAAA
TGTGGATGCCAAATTTCAGCAACAGTTTCGCCATCTTTTGAGTGTAAACT
TTGAGGAATTCGTTGCGGAGACCAAGGAACGGAACGCGGACTTAGACTGG
GTAAACCCCAAGCTGGACGAGAGACTGCAGCTGGAACTGGGGCAACGCCA
GTTGGAGGAGAATGCCAAGAAACGGCTAGAAGCACGGAAAAAACTGCCCA
CCATGAAATACGCCGACGATATTATCCAGGCTGTGCGGGAAAACCAAGTA
ATACTCATTGTAGGAAGCACTGGATGTGGCAAGACCACTCAGGTGCCTCA
AATCCTCCTCGACGACGCCATTTCCCGCGGATGTGCCTCGTCGTGCCGCA
TCATTTGCACTCAGCCACGAAGGATTTCAGCCATCGCCATTGCCGAGTGG
GTGAGTTACGAGCGCTGCGAGAGCCTGGGCAATTCGGTAGGCTACCAGAT
TCGCCTAGAGAGCAGAAGGCCAGGGAGAGAGCCTCCATCACTTACTGCAC
CACAGGCGTTCTACTGCAGCAGCTTCAATCGGACCACTGATGCACAATCT
AAGTGTCTTAATCCTGGATGAGATCCACGAACGCACGTGGAAACAGATCT
CCTATGGGTCTCTAAAGGTTATCCTGCCCCCCAACCCGATCTAAGTGATC
CTGATGAGTGCAACTGTACGGAGCAGGATTTTTGTGACTACTTTAACACT
GTCCCATGTTCCCGCATCGAGGGCGTGATGTTTCCCGTGAAGATGCCTCT
ACTGGGAGATAGTTCTTGTCAAACACGAACTAACAGTTTCAAAGTTTCCG
CGAATCGTCGTCCAAGCGCGTATCCGCCTTGGACGCAGATGAAACACAGA
GCTAGGAATAGAACCGATCCTGCCACGCACAGGAAACTCGTAGCAATAAG
CTTGTGGCTCGCACAACTTCGTCTTGTGTCGCCGGAATGCCGGAAGTCAG
TCTGC
FMO03293.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9323-RB | 3125 | CG9323-RB | 204..1363 | 38..1192 | 4935 | 96.2 | Plus |
| CG9323-RA | 3019 | CG9323-RA | 98..1257 | 38..1192 | 4935 | 96.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20756710..20757782 | 1103..38 | 4555 | 97.5 | Minus |
Blast to na_te.dros performed 2014-11-28 20:26:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gypsy6 | 7826 | gypsy6 GYPSY6 7826bp | 6587..6650 | 955..892 | 113 | 64.1 | Minus |
FMO03293.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:01:08 Download gff for
FMO03293.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9323-RA | 206..1249 | 30..1070 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:34 Download gff for
FMO03293.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9323-RA | 94..1137 | 30..1070 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:31 Download gff for
FMO03293.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9323-RA | 94..1137 | 30..1070 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:31 Download gff for
FMO03293.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20756737..20757786 | 30..1076 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:34 Download gff for
FMO03293.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20756737..20757786 | 30..1076 | 97 | | Minus |
