FMO03303.5prime Sequence
1247 bp (1042 high quality bases) assembled on 2008-07-09
> FMO03303.5prime
TATAGCATACATAAAACGAAGTTATCAGTCGACATGGATACCAACGAGCG
ATCTCCGTTTTGGAAGCTAATCCGTCATCCTTTGCTCATCGTAGAGCAGT
TAGTGATGAATGCTCGCTTTGAATTGCTGGGAAAGCTACTAGATGCGGCT
CGTTCCAAGTTGCTAAAGGAGAGACCACTTGGACCATGTCCGTACTGTTT
TGACAAAACGGGCCATGTCTATGATGTCCAGTCCAGTGCTGGTTTAGGAA
GTGGAGCGGGAGAAACACCGGCAAAGATACGTTTTCAACTGGGACAAACA
ACATCCGAGGCTTTTATTCTGCTCAACTTCAATTCCTACCAGCAGGATCA
CTTTGTGGGTCAGGATTGTTTGGACCTATTACTGCGAATTTACGCCAGCA
AAGCTCTGGACTACCATGTGGCGAATGTGCGTGCTGCTTCTGAGCCCAGT
TCTCTTGGCACAGATGTACATAATTCACTGGACTCTCTTTGTGGTGCCTT
CGTGATGCCCAAGCAAGCACCCAACCGACAGCAGTGGACGCGGGACGAGG
AGGCCAGCCACTGCATGTGCTGTCGCCGAGCAGCATTCACTATGTTGATG
CGGAGACATCATTGCCGTAGGTGCGGGCGGGTGGTATGCTACGCCTGCTC
CACCCATCGAATACGCATCCCAGAGCTTTACGACGAGTTGGAGGTGCGGA
TCTGCAACGATTGTGCAGCGTGCAGCACGCCTGCCAAGGATCAAGGTGAT
GGCACTTCTAGTGAGCGGAGTGCTATCTCGGGACAAGTATCAAAATCTTC
TGGACGGAGTGATTCCTGCAAATGGCAGTTGAGTGGGATTATTACACACG
ATAAACTGCTGCGCGAGGAGTTCTCCTATGAACACGCGCCCAGTGTGGCC
TTCAGTTTGTTCATACTTCGCAATCATGTCGAGCAGCGCAGTTGCGTTGA
TTTGCTGCTCTTCCACTGTCGCAAACTGAAAAGCTAATTGTGCCCATTCA
GAGTTGGACTACGGTTTGGTGGACAAGATGATAACTGTTCTGGCCTTTCG
CCGCAAAAGTTCGTGCGCAACAGGAAGAGCTGGAAAAAATTCGTGAGCAC
TTCGAAATATAATTGGCAGGGTTCAGCAGGCTGGTAGTCCTGAATCCCAC
TGATCGCTCAATAACCAAATCTGGCCAAGCTGGCTGACTTTGTGGTACGC
GAAACACTCGGAACTCTCTATCTTCTGGAAGAGATGCATCTGGAGAA
FMO03303.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5270-RB | 7465 | CG5270-RB | 4123..5283 | 34..1188 | 5220 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11426394..11427422 | 34..1061 | 4865 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:43:02 has no hits.
FMO03303.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:05:44 Download gff for
FMO03303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5270-RA | 35..1103 | 34..1101 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:55:42 Download gff for
FMO03303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5270-RB | 4123..5191 | 34..1101 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:15:58 Download gff for
FMO03303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5270-RB | 4123..5191 | 34..1101 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:15:58 Download gff for
FMO03303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11426394..11427419 | 34..1058 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:55:42 Download gff for
FMO03303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7252116..7253141 | 34..1058 | 99 | -> | Plus |
