FMO03304.5prime Sequence
1250 bp (1005 high quality bases) assembled on 2008-07-09
> FMO03304.5prime
GTATAGCATACATAAAACAAAGTTATCAGTCGACATGGCCCAGACGGCAT
ACTTGAAGGTGACACGCATCGCGATGCGCTCCGCTTCGAATCTTTCCAAA
CGGCGGGTGGAGGAGCTGAACTCCGGGCTCGGCGAGCTACGGCAGCTGCT
GTCTTGCGTGGTCTGCTGCCAGCTGCTGGTGGATCCCTACTCGCCCAAGG
GCAAGCGGTGCCAGCACAACGTGTGCCGGCTGTGTCTGCGCGGTAAGAAG
CATCTGTTTCCCAGCTGCACCCAGTGCGAGGGTTGCTCCGACTTCAAGAC
CTACGAGGAGAACCGTATGATGGCCGCCCAGCTACTGTGCTACAAGACGC
TGTGCGTCCACCTGCTCCACTCGGCATTATTTGGTGAGCTGGCCGGGATG
CGGCCCCAGGTGGCCAGGGAGCTGGTGCCTCGCATCAAGCTGCCTCCCAA
AACCACACAGGAGTTCATTCGCGAGGGCTCAAACATCTCCGACACTTTTG
ACATCTTTCTGCCCCAGCCGGATTTGCCGTTCCTCAAGGACATGCCCACA
TCGCTGCCCGCAGAGACGCCGCCTACGTCGGCGGTCACGACTCCGGAACT
GCCCTATGATCACCACCTCAACATCAGCGACATTGAGGCGGAGGCGGCGG
CCACAGCGGAGCAGGGTCACTTCTCGCCGCTTCCCCTGCTGCCCACAGGA
TCTCGCATGGGCATGCTCTCTCACGCCGGGCAAATAGTCATTGCCACCGA
GAGCTCGGAGTCGGGCTTCATGGACCAAGCGTGGACGGATCAGTAGACCT
GTCTGGCACGGTTTCGGTGTCCAAATACACAATAGCGGCAACAACTTTGC
TGTCTCCTACGTGATGCCCACTTCTGCGACACGAAGTTCGATCCACAGGG
AACTGCAAATCGGGCAGGGTGGTGCAAATGGCCGGACTCCACTCAGTTGG
CTGTGCTGGCTGCCGGTTGAGAGACGTCGAGACGTCCACAACAGTTGACT
GTGCTCTTCCACCACCGTTGAAGAAGACCGTTGAAACCTCCACGCACTAG
AAGTGCTTACCCTCCGCTGAGAAACCAACGAAATCTTCTGGATCATGGCT
TATTCTGCAAGGTGAGGGATTCTGAAGAAGGGCCTGATTGAGAGAGATCG
TTGGAGAAGGCCCAAGGGAACTCTATTTCGCGTCAAGGGTGGTACTGAAA
CCAATGGAAGAGAGGAGAATACACCCTTTTGGAGATGTGTAACCATCTTT
FMO03304.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:12:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| msl-2-RA | 3843 | CG3241-RA | 473..1606 | 34..1173 | 4945 | 96.7 | Plus |
| msl-2-RB | 3710 | CG3241-RB | 340..1473 | 34..1173 | 4945 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:12:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3464589..3465640 | 1086..34 | 4540 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:12:22 has no hits.
FMO03304.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:05:46 Download gff for
FMO03304.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| msl-2-RA | 463..1540 | 24..1103 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:47 Download gff for
FMO03304.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| msl-2-RB | 331..1408 | 24..1103 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:57 Download gff for
FMO03304.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| msl-2-RB | 331..1408 | 24..1103 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:57 Download gff for
FMO03304.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3464572..3465649 | 24..1103 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:47 Download gff for
FMO03304.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3464572..3465649 | 24..1103 | 97 | | Minus |
