FMO03311.5prime Sequence
1019 bp (444 high quality bases) assembled on 2008-07-09
> FMO03311.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGAATGAGATTAGGG
GCGAGGATAACCTCCAACGGCTGCGCAACTATATCCTGCGACCGGAGCTG
TCCCTCCACAATCCCCTGCCGGATGTTTTGCCCCGCAAATTCCATCCGAT
GCGCCTGTTGCATGCCCCCCGTTGCCCGGGAAGCACTAAGTTGGCTCCTC
GCCGCGACCAGAGTGGTCACATACTTGAGTTCGTGGAATTGGACTTGGAG
GCCGTGGGCGCCAATGCCAACAACTCGATGTCCATGCAGCGGGAGCCGGG
CTTGCTGGAAGACGCGACGCGTGGCTCCCACTCCAATTTTCCCTTTTGGC
CAGGCGGTTTCGATGAGCAGCGCCAGCAGATCGCAGCTCTGGATGTCAGC
AACTTTCAGTTCGGGGACAAGCTGCTAACGGTGCCACCGGGCTTCAGCTC
TGGCTACGACTTCTTCCAATCGCAATCTGTAACACTGCCGCCTGTGGTCG
CCGATCCCAGTAACGTTGATCTATTGGAAAACCTAGAACAGGATCTGGAC
GTCCAGGAATGGATGAAGCTTACGCGTAGTGAGGAAACAAGCTCCACTGG
AACGCCTAAAAGTCCAAAACAGTCGAACGTGCAATTACCTTCAGAGGAGT
TCAGAGACGTGGACGATCACATTATGAAGGCTGACCTTAAGCCTGTGCTA
AACATTTCCACCACAACCACGAACTTCTGAGCGATTGGGCCGAAATGGTG
GACATAAGCCAACCCATCAATAACTTTAAAGAGCAGATACCATGCCCCGC
CATGGATTTCCCCTTCGAACTGGATGTCTTTCAAAAGCAGGCCATTCTCA
AGCTGGGAACATCGCCCAGTACGTTTTCGTTGCACCGCATACATCTGCTG
GCCAGACAGTTGTAACTGATATGCCATCGCTCTGGCCAAGCGTGATCTCA
CCGACACCAATCTAAACATTCTCGATCAAGGCGTTGTCAATCAAAGTATC
GCGACTTCCAAAAAACCTT
FMO03311.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:13:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tst-RB | 3821 | CG10210-RB | 98..1083 | 35..1019 | 4470 | 97.3 | Plus |
| tst-RA | 4332 | CG10210-RA | 98..1083 | 35..1019 | 4470 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:13:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23771777..23772762 | 1019..35 | 4295 | 97.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:13:34 has no hits.
FMO03311.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:01:09 Download gff for
FMO03311.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tst-RA | 46..1031 | 35..1019 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:50 Download gff for
FMO03311.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tst-RA | 98..1083 | 35..1019 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:45:28 Download gff for
FMO03311.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tst-RA | 98..1083 | 35..1019 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:45:28 Download gff for
FMO03311.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23771777..23772762 | 35..1019 | 97 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:50 Download gff for
FMO03311.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19597499..19598484 | 35..1019 | 97 | -> | Minus |
