FMO03314.5prime Sequence
1232 bp (1054 high quality bases) assembled on 2008-07-09
> FMO03314.5prime
ATAGCATACCTTATACGAAGTTATCAGTCGACATGGACGAATCGGTGCGA
TATGACCGCTGTCACCAGGTGCAGCTGGGCGTTTTCAACGAGTCGCAGTT
GTCTTCTGTGGAGGAGGACGTGCAGAATCTGCCTCAGCAGGGAACGGGAA
ACATCCTCTTCACCCACGACGGCGTGCTTCTGAAGAAAGCCAGTGCGGAG
CACATCGCGGATCTGAACACCAGCGGCTCCCTTTCCTTGGTGGAATATTC
GCGATCCATCGCGGAAATGCCCCGTAGGAGACTGTTGCTCGAGTGGCAGC
CCAATGACAGTATCATGATTGCGGACGACAGCCAGGATCAGGGAGACTGG
GCGCTGGTAGACAGGATTTCCGGGCGAACACGCACCACATCCGAGTGCCG
TGCCTTCAACACTAGACCCATTGAACCGAGCGGTGGAGCGACCACCCGTT
CGCGAGTCATGCGTGCCCAACTGGAAGATTTGTCTTCTGTAGAGGTGCGC
CATCGCGGACAGACGATCCGTTTTATGCGGAAAGGGGCTAATGGCGTCCA
CAGCGAGTTCTTTTTCCAGCATGGAAACGCAGACCTATTTGTGCGCTCCA
TGCGCGATCAGCACCTAATCGAGAACGCCGAGACTAGTCGCAGTGGCGGC
GAGGTGTATGCCATATTGACCACCGAGAACCAAAAATTGAAAAAGACGTT
TGCTGAACTTGACATTGGCCAGATTAAGGCAAGCCAATTGCCACGTGAGA
GCTGGCTGCCCAACAAGCTGGCCGGAATCCTGGGCAACATTCCCGATTAC
GTACAGCCTCCGTTCCAGCGTTCGCCCAAATCTAGGCCGGGAGTCTTGAT
CTCTGGCGATCGGCAGACTTCACCGGAAAATTATCAAATATTGGGCTAAG
TGGCAGCACAATAGTGCCTGTTCCTCAAACGGACAGTCTCGTGGGGGCAG
TGCAGAGAAGTCTCCCGCCGAAAGGCGAGCTGGAAACTTCTTAATGCCCA
GAACGAAAAAAAGTTAACAACTTGCCGATCGCAGCGGGTGGAAGAGAGGT
CATCCTCTAACCGAGAACGCAGTGCTGAGTTCAGAACGCCCGACGGCCGA
ATTTCGATAGCGCCGGATCAAGGAACTCATCTTCCGCGGCGGGCTCGTGC
AAAGACCTGGGCCTGAGTTGGAGTTCCTTCAAATACTTACTTGGTCGAAT
ATCTCTATTTGAGAGAGAGGAATCGATGAAGC
FMO03314.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tbc1d15-17-RC | 3121 | CG11490-RC | 106..1262 | 32..1180 | 5175 | 97.4 | Plus |
| Tbc1d15-17-RB | 3129 | CG11490-RB | 333..1489 | 32..1180 | 5175 | 97.4 | Plus |
| Tbc1d15-17-RA | 2902 | CG11490-RA | 106..1262 | 32..1180 | 5175 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 207707..208585 | 149..1026 | 4095 | 99 | Plus |
| 2L | 23513712 | 2L | 207511..207631 | 32..152 | 605 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:34:04 has no hits.
FMO03314.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:02:45 Download gff for
FMO03314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11490-RA | 109..1249 | 25..1163 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:24 Download gff for
FMO03314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tbc1d15-17-RA | 102..1242 | 25..1163 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:21:34 Download gff for
FMO03314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tbc1d15-17-RA | 102..1242 | 25..1163 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:21:34 Download gff for
FMO03314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 207507..207631 | 25..152 | 97 | -> | Plus |
| 2L | 207711..208608 | 153..1048 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:24 Download gff for
FMO03314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 207507..207631 | 25..152 | 97 | -> | Plus |
| arm_2L | 207711..208608 | 153..1048 | 98 | -> | Plus |
