FMO03317.5prime Sequence
1239 bp (1019 high quality bases) assembled on 2008-07-09
> FMO03317.5prime
TCGTATAGCATAATAAAAAAAAGTTATCAGTCGACATGGACATGATTACG
GTGGGGCAGAGCGTCAAGATCAAGCGGACGGATGGCCGCGTCCACATGGC
CGTGGTGGCGGTGATCAACCAGTCGGGCAAGTGCATCACAGTCGAATGGT
ACGAGCGCGGCGAAACGAAGGGCAAGGAGGTAGAACTGGACGCCATACTC
ACGCTCAATCCGGAGCTAATGCAAGATACTGTCGAACAGCACGCCGCCCC
GGAGCCCAAGAAACAAGCCACCGCGCCGATGAACCTCTCGCGTAATCCCA
CACAATCGGCTATCGGTGGCAATCTCACCAGCCGTATGACCATGGCCGGA
AACATGCTGAACAAGATCCAGGAAAGCCAGTCGATTCCCAATCCGATTGT
CAGCAGCAATAGCGTGAATACAAACAGCAACTCCAACACTACGGCCGGCG
GAGGTGGTGGCACCACAACGTCGACGACCACTGGATTACAGCGTCCACGG
TACTCGCAAGCTGCTACCGGCCAGCAGCAGACAAGGATCGCCTCGGCGGT
GCCTAATAACACATTGCCCAATCCCAGCGCGGCAGCCAGTGCTGGTCCGG
CGGCACAAGGAGTCGCCACTGCGGCCACAACCCAGGGAGCTGGCGGCGCT
AGTACCCGGCGATCGCACGCATTGAAAGAGGTGGAGCGACTGAAGGAGAA
TCGCGAGAAGCGACGCGCCCGACAGGCCGAGATGAAGGAGGAGAAGGTGG
CGCTGATGAACCAGGATCCGGGCAATCCAAACTGGGAGACGGCGCAAATG
ATACGCGAATATCAGAGCACGCTGGAATTTGTGCCGCTGCTCGATGGCCA
GGCCGTCGATGACCATCAGATCACAGTGTGCGTGCGCAAGCGTCCCATTA
GCCGCAAGGAGGTCAATCGCAAGGAAGATCGATGTCATTTCGGTGCCGCG
CAAGGACATGCTCATCGTGCACGAGCCGCGCAGCAAGGTCGAACTTCACC
AAGGTTCCTGAAAAACCACAGGTTTCGCTCGACTACGCCTTCACGACACG
TGCGACATGGCATGGTATACAAATACACAGCAAGCCGTTGGTGAAATCAA
TTTCGAGGGCGAAATGGCGAACGTGCTTCGCCTACGCCCGGACGGAATCG
GGCTAATCGACACCATGGGCGGTGATTACTGGAAGGGTCAAGAACTGCAA
ACCGACACTCTCCCCTGTGTGCCGGCGCCACAGAGAATG
FMO03317.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Klp10A-RF | 4467 | CG1453-RF | 431..1600 | 35..1200 | 5310 | 97.4 | Plus |
| Klp10A-RC | 4543 | CG1453-RC | 507..1676 | 35..1200 | 5310 | 97.4 | Plus |
| Klp10A-RB | 4754 | CG1453-RB | 718..1887 | 35..1200 | 5310 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11134880..11135917 | 1072..35 | 4830 | 98.9 | Minus |
| X | 23542271 | X | 11133582..11133677 | 1175..1081 | 215 | 88.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:12:52 has no hits.
FMO03317.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:07:28 Download gff for
FMO03317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp10A-RD | 226..1388 | 29..1188 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:07:01 Download gff for
FMO03317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp10A-RD | 334..1496 | 29..1188 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:47 Download gff for
FMO03317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp10A-RB | 713..1875 | 29..1188 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:47 Download gff for
FMO03317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11134880..11135920 | 30..1072 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:07:01 Download gff for
FMO03317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11028913..11029953 | 30..1072 | 98 | <- | Minus |
